Protein–RNA interactions for Protein: Q8K4G2

Col23a1, Collagen alpha-1(XXIII) chain, mousemouse

Predictions only

Length 532 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col23a1Q8K4G2 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC26.7■■□□□ 1.86
Col23a1Q8K4G2 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
Col23a1Q8K4G2 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC26.69■■□□□ 1.86
Col23a1Q8K4G2 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC26.69■■□□□ 1.86
Col23a1Q8K4G2 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC26.69■■□□□ 1.86
Col23a1Q8K4G2 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC26.68■■□□□ 1.86
Col23a1Q8K4G2 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC26.68■■□□□ 1.86
Col23a1Q8K4G2 Gm43137-201ENSMUST00000198052 594 ntBASIC26.68■■□□□ 1.86
Col23a1Q8K4G2 Gm5874-201ENSMUST00000096101 508 ntBASIC26.68■■□□□ 1.86
Col23a1Q8K4G2 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC26.67■■□□□ 1.86
Col23a1Q8K4G2 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Col23a1Q8K4G2 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
Col23a1Q8K4G2 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Col23a1Q8K4G2 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC26.67■■□□□ 1.86
Col23a1Q8K4G2 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC26.67■■□□□ 1.86
Col23a1Q8K4G2 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Col23a1Q8K4G2 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC26.66■■□□□ 1.86
Col23a1Q8K4G2 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
Col23a1Q8K4G2 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Col23a1Q8K4G2 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
Col23a1Q8K4G2 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC26.66■■□□□ 1.86
Col23a1Q8K4G2 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
Col23a1Q8K4G2 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Col23a1Q8K4G2 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Col23a1Q8K4G2 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Col23a1Q8K4G2 Mir7075-201ENSMUST00000184187 82 ntBASIC26.65■■□□□ 1.86
Col23a1Q8K4G2 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC26.65■■□□□ 1.86
Col23a1Q8K4G2 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC26.64■■□□□ 1.86
Col23a1Q8K4G2 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
Col23a1Q8K4G2 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
Col23a1Q8K4G2 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
Col23a1Q8K4G2 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC26.64■■□□□ 1.86
Col23a1Q8K4G2 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
Col23a1Q8K4G2 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
Col23a1Q8K4G2 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Col23a1Q8K4G2 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Col23a1Q8K4G2 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Col23a1Q8K4G2 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Col23a1Q8K4G2 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Col23a1Q8K4G2 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
Col23a1Q8K4G2 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Col23a1Q8K4G2 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC26.61■■□□□ 1.85
Col23a1Q8K4G2 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Col23a1Q8K4G2 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC26.61■■□□□ 1.85
Col23a1Q8K4G2 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC26.61■■□□□ 1.85
Col23a1Q8K4G2 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC26.6■■□□□ 1.85
Col23a1Q8K4G2 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Col23a1Q8K4G2 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Col23a1Q8K4G2 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Col23a1Q8K4G2 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Col23a1Q8K4G2 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC26.58■■□□□ 1.85
Col23a1Q8K4G2 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
Col23a1Q8K4G2 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
Col23a1Q8K4G2 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
Col23a1Q8K4G2 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC26.57■■□□□ 1.84
Col23a1Q8K4G2 Gm7291-201ENSMUST00000199147 382 ntBASIC26.57■■□□□ 1.84
Col23a1Q8K4G2 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC26.57■■□□□ 1.84
Col23a1Q8K4G2 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Col23a1Q8K4G2 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC26.57■■□□□ 1.84
Col23a1Q8K4G2 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC26.56■■□□□ 1.84
Col23a1Q8K4G2 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Col23a1Q8K4G2 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC26.56■■□□□ 1.84
Col23a1Q8K4G2 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC26.55■■□□□ 1.84
Col23a1Q8K4G2 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC26.54■■□□□ 1.84
Col23a1Q8K4G2 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Col23a1Q8K4G2 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC26.54■■□□□ 1.84
Col23a1Q8K4G2 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Col23a1Q8K4G2 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
Col23a1Q8K4G2 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC26.54■■□□□ 1.84
Col23a1Q8K4G2 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
Col23a1Q8K4G2 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Col23a1Q8K4G2 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Col23a1Q8K4G2 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
Col23a1Q8K4G2 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Col23a1Q8K4G2 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC26.52■■□□□ 1.84
Col23a1Q8K4G2 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
Col23a1Q8K4G2 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC26.52■■□□□ 1.84
Col23a1Q8K4G2 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
Col23a1Q8K4G2 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC26.52■■□□□ 1.84
Col23a1Q8K4G2 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
Col23a1Q8K4G2 AC112142.1-201ENSMUST00000228796 918 ntBASIC26.52■■□□□ 1.84
Col23a1Q8K4G2 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.84
Col23a1Q8K4G2 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC26.51■■□□□ 1.83
Col23a1Q8K4G2 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC26.51■■□□□ 1.83
Col23a1Q8K4G2 Gm8493-201ENSMUST00000196881 489 ntBASIC26.51■■□□□ 1.83
Col23a1Q8K4G2 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.83
Col23a1Q8K4G2 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
Col23a1Q8K4G2 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Col23a1Q8K4G2 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Col23a1Q8K4G2 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC26.5■■□□□ 1.83
Col23a1Q8K4G2 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
Col23a1Q8K4G2 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC26.5■■□□□ 1.83
Col23a1Q8K4G2 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Col23a1Q8K4G2 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC26.5■■□□□ 1.83
Col23a1Q8K4G2 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Col23a1Q8K4G2 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC26.49■■□□□ 1.83
Col23a1Q8K4G2 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC26.49■■□□□ 1.83
Col23a1Q8K4G2 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC26.49■■□□□ 1.83
Col23a1Q8K4G2 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC26.49■■□□□ 1.83
Col23a1Q8K4G2 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Retrieved 100 of 76,532 protein–RNA pairs in 13.9 ms