Protein–RNA interactions for Protein: Q8K0S5

Rtn4rl1, Reticulon-4 receptor-like 1, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4rl1Q8K0S5 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC21.95■■□□□ 1.1
Rtn4rl1Q8K0S5 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Rtn4rl1Q8K0S5 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC21.94■■□□□ 1.1
Rtn4rl1Q8K0S5 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC21.94■■□□□ 1.1
Rtn4rl1Q8K0S5 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Rtn4rl1Q8K0S5 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Rtn4rl1Q8K0S5 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
Rtn4rl1Q8K0S5 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC21.93■■□□□ 1.1
Rtn4rl1Q8K0S5 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC21.93■■□□□ 1.1
Rtn4rl1Q8K0S5 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
Rtn4rl1Q8K0S5 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Rtn4rl1Q8K0S5 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Rtn4rl1Q8K0S5 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC21.92■■□□□ 1.1
Rtn4rl1Q8K0S5 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Rtn4rl1Q8K0S5 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Rtn4rl1Q8K0S5 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Rtn4rl1Q8K0S5 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Rtn4rl1Q8K0S5 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Rtn4rl1Q8K0S5 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Rtn4rl1Q8K0S5 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Rtn4rl1Q8K0S5 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Rtn4rl1Q8K0S5 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Rtn4rl1Q8K0S5 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC21.9■■□□□ 1.1
Rtn4rl1Q8K0S5 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
Rtn4rl1Q8K0S5 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Rtn4rl1Q8K0S5 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Rtn4rl1Q8K0S5 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Rtn4rl1Q8K0S5 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
Rtn4rl1Q8K0S5 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.1
Rtn4rl1Q8K0S5 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Rtn4rl1Q8K0S5 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Rtn4rl1Q8K0S5 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
Rtn4rl1Q8K0S5 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC21.89■■□□□ 1.09
Rtn4rl1Q8K0S5 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Rtn4rl1Q8K0S5 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Rtn4rl1Q8K0S5 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Rtn4rl1Q8K0S5 AC153890.1-201ENSMUST00000220021 2469 ntBASIC21.88■■□□□ 1.09
Rtn4rl1Q8K0S5 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Rtn4rl1Q8K0S5 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC21.88■■□□□ 1.09
Rtn4rl1Q8K0S5 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
Rtn4rl1Q8K0S5 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Rtn4rl1Q8K0S5 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Rtn4rl1Q8K0S5 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Rtn4rl1Q8K0S5 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Rtn4rl1Q8K0S5 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
Rtn4rl1Q8K0S5 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Rtn4rl1Q8K0S5 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Rtn4rl1Q8K0S5 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Rtn4rl1Q8K0S5 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC21.86■■□□□ 1.09
Rtn4rl1Q8K0S5 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
Rtn4rl1Q8K0S5 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
Rtn4rl1Q8K0S5 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Rtn4rl1Q8K0S5 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Rtn4rl1Q8K0S5 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Rtn4rl1Q8K0S5 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
Rtn4rl1Q8K0S5 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Rtn4rl1Q8K0S5 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Rtn4rl1Q8K0S5 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Rtn4rl1Q8K0S5 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Rtn4rl1Q8K0S5 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC21.84■■□□□ 1.09
Rtn4rl1Q8K0S5 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Rtn4rl1Q8K0S5 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Rtn4rl1Q8K0S5 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
Rtn4rl1Q8K0S5 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC21.83■■□□□ 1.09
Rtn4rl1Q8K0S5 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC21.83■■□□□ 1.09
Rtn4rl1Q8K0S5 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Rtn4rl1Q8K0S5 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC21.83■■□□□ 1.08
Rtn4rl1Q8K0S5 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC21.83■■□□□ 1.08
Rtn4rl1Q8K0S5 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Rtn4rl1Q8K0S5 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Rtn4rl1Q8K0S5 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Rtn4rl1Q8K0S5 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Rtn4rl1Q8K0S5 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Rtn4rl1Q8K0S5 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Rtn4rl1Q8K0S5 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Rtn4rl1Q8K0S5 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Rtn4rl1Q8K0S5 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Rtn4rl1Q8K0S5 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC21.8■■□□□ 1.08
Rtn4rl1Q8K0S5 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Rtn4rl1Q8K0S5 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Rtn4rl1Q8K0S5 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC21.8■■□□□ 1.08
Rtn4rl1Q8K0S5 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Rtn4rl1Q8K0S5 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Rtn4rl1Q8K0S5 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Rtn4rl1Q8K0S5 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Rtn4rl1Q8K0S5 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
Rtn4rl1Q8K0S5 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Rtn4rl1Q8K0S5 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Rtn4rl1Q8K0S5 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Rtn4rl1Q8K0S5 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Rtn4rl1Q8K0S5 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Rtn4rl1Q8K0S5 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Rtn4rl1Q8K0S5 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC21.78■■□□□ 1.08
Rtn4rl1Q8K0S5 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Rtn4rl1Q8K0S5 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Rtn4rl1Q8K0S5 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
Rtn4rl1Q8K0S5 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Rtn4rl1Q8K0S5 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Rtn4rl1Q8K0S5 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
Rtn4rl1Q8K0S5 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC21.76■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms