Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ShfQ8CG80 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
ShfQ8CG80 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ShfQ8CG80 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
ShfQ8CG80 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ShfQ8CG80 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ShfQ8CG80 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ShfQ8CG80 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ShfQ8CG80 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
ShfQ8CG80 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ShfQ8CG80 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ShfQ8CG80 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ShfQ8CG80 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ShfQ8CG80 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
ShfQ8CG80 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.02■□□□□ 0.64
ShfQ8CG80 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
ShfQ8CG80 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC19.02■□□□□ 0.63
ShfQ8CG80 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
ShfQ8CG80 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
ShfQ8CG80 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ShfQ8CG80 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.01■□□□□ 0.63
ShfQ8CG80 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ShfQ8CG80 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ShfQ8CG80 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ShfQ8CG80 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ShfQ8CG80 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
ShfQ8CG80 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ShfQ8CG80 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
ShfQ8CG80 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
ShfQ8CG80 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ShfQ8CG80 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ShfQ8CG80 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19■□□□□ 0.63
ShfQ8CG80 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ShfQ8CG80 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ShfQ8CG80 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
ShfQ8CG80 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC18.99■□□□□ 0.63
ShfQ8CG80 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ShfQ8CG80 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC18.99■□□□□ 0.63
ShfQ8CG80 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
ShfQ8CG80 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ShfQ8CG80 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ShfQ8CG80 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC18.98■□□□□ 0.63
ShfQ8CG80 Nsd1-206ENSMUST00000224918 1001 ntBASIC18.98■□□□□ 0.63
ShfQ8CG80 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
ShfQ8CG80 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ShfQ8CG80 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
ShfQ8CG80 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ShfQ8CG80 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ShfQ8CG80 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ShfQ8CG80 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
ShfQ8CG80 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
ShfQ8CG80 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ShfQ8CG80 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
ShfQ8CG80 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
ShfQ8CG80 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ShfQ8CG80 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
ShfQ8CG80 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ShfQ8CG80 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
ShfQ8CG80 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ShfQ8CG80 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
ShfQ8CG80 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ShfQ8CG80 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ShfQ8CG80 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
ShfQ8CG80 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ShfQ8CG80 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ShfQ8CG80 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ShfQ8CG80 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ShfQ8CG80 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC18.95■□□□□ 0.62
ShfQ8CG80 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ShfQ8CG80 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
ShfQ8CG80 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ShfQ8CG80 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ShfQ8CG80 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ShfQ8CG80 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ShfQ8CG80 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
ShfQ8CG80 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ShfQ8CG80 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ShfQ8CG80 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC18.95■□□□□ 0.62
ShfQ8CG80 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ShfQ8CG80 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
ShfQ8CG80 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ShfQ8CG80 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ShfQ8CG80 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ShfQ8CG80 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ShfQ8CG80 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ShfQ8CG80 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
ShfQ8CG80 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC18.93■□□□□ 0.62
ShfQ8CG80 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ShfQ8CG80 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC18.93■□□□□ 0.62
ShfQ8CG80 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ShfQ8CG80 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ShfQ8CG80 AC164883.3-201ENSMUST00000227396 1774 ntBASIC18.93■□□□□ 0.62
ShfQ8CG80 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ShfQ8CG80 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ShfQ8CG80 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ShfQ8CG80 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
ShfQ8CG80 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ShfQ8CG80 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ShfQ8CG80 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ShfQ8CG80 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms