Protein–RNA interactions for Protein: Q8BRF7

Scfd1, Sec1 family domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1Q8BRF7 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC24.64■■□□□ 1.53
Scfd1Q8BRF7 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
Scfd1Q8BRF7 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Scfd1Q8BRF7 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC24.63■■□□□ 1.53
Scfd1Q8BRF7 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC24.63■■□□□ 1.53
Scfd1Q8BRF7 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Scfd1Q8BRF7 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Scfd1Q8BRF7 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC24.62■■□□□ 1.53
Scfd1Q8BRF7 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC24.62■■□□□ 1.53
Scfd1Q8BRF7 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC24.62■■□□□ 1.53
Scfd1Q8BRF7 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Scfd1Q8BRF7 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Scfd1Q8BRF7 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
Scfd1Q8BRF7 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Scfd1Q8BRF7 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC24.61■■□□□ 1.53
Scfd1Q8BRF7 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Scfd1Q8BRF7 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
Scfd1Q8BRF7 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
Scfd1Q8BRF7 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC24.61■■□□□ 1.53
Scfd1Q8BRF7 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Scfd1Q8BRF7 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC24.59■■□□□ 1.53
Scfd1Q8BRF7 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC24.59■■□□□ 1.53
Scfd1Q8BRF7 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC24.59■■□□□ 1.53
Scfd1Q8BRF7 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC24.59■■□□□ 1.53
Scfd1Q8BRF7 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Scfd1Q8BRF7 Gm10620-201ENSMUST00000098379 1332 ntBASIC24.59■■□□□ 1.53
Scfd1Q8BRF7 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.53
Scfd1Q8BRF7 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Scfd1Q8BRF7 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC24.58■■□□□ 1.53
Scfd1Q8BRF7 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC24.58■■□□□ 1.53
Scfd1Q8BRF7 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC24.58■■□□□ 1.53
Scfd1Q8BRF7 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC24.58■■□□□ 1.53
Scfd1Q8BRF7 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Scfd1Q8BRF7 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC24.58■■□□□ 1.52
Scfd1Q8BRF7 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC24.57■■□□□ 1.52
Scfd1Q8BRF7 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
Scfd1Q8BRF7 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Scfd1Q8BRF7 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Scfd1Q8BRF7 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Scfd1Q8BRF7 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
Scfd1Q8BRF7 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Scfd1Q8BRF7 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Scfd1Q8BRF7 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC24.56■■□□□ 1.52
Scfd1Q8BRF7 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Scfd1Q8BRF7 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
Scfd1Q8BRF7 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC24.55■■□□□ 1.52
Scfd1Q8BRF7 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC24.55■■□□□ 1.52
Scfd1Q8BRF7 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Scfd1Q8BRF7 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC24.54■■□□□ 1.52
Scfd1Q8BRF7 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Scfd1Q8BRF7 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Scfd1Q8BRF7 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC24.54■■□□□ 1.52
Scfd1Q8BRF7 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Scfd1Q8BRF7 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Scfd1Q8BRF7 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Scfd1Q8BRF7 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Scfd1Q8BRF7 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC24.53■■□□□ 1.52
Scfd1Q8BRF7 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC24.53■■□□□ 1.52
Scfd1Q8BRF7 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Scfd1Q8BRF7 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC24.53■■□□□ 1.52
Scfd1Q8BRF7 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Scfd1Q8BRF7 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC24.52■■□□□ 1.52
Scfd1Q8BRF7 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Scfd1Q8BRF7 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC24.52■■□□□ 1.52
Scfd1Q8BRF7 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Scfd1Q8BRF7 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Scfd1Q8BRF7 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Scfd1Q8BRF7 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC24.51■■□□□ 1.51
Scfd1Q8BRF7 AC116713.1-201ENSMUST00000215074 430 ntBASIC24.51■■□□□ 1.51
Scfd1Q8BRF7 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC24.51■■□□□ 1.51
Scfd1Q8BRF7 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Scfd1Q8BRF7 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Scfd1Q8BRF7 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC24.5■■□□□ 1.51
Scfd1Q8BRF7 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC24.5■■□□□ 1.51
Scfd1Q8BRF7 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC24.5■■□□□ 1.51
Scfd1Q8BRF7 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC24.5■■□□□ 1.51
Scfd1Q8BRF7 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Scfd1Q8BRF7 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Scfd1Q8BRF7 Gm15039-201ENSMUST00000118914 875 ntBASIC24.49■■□□□ 1.51
Scfd1Q8BRF7 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC24.49■■□□□ 1.51
Scfd1Q8BRF7 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Scfd1Q8BRF7 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Scfd1Q8BRF7 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Scfd1Q8BRF7 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC24.49■■□□□ 1.51
Scfd1Q8BRF7 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC24.49■■□□□ 1.51
Scfd1Q8BRF7 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Scfd1Q8BRF7 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
Scfd1Q8BRF7 AC158990.1-201ENSMUST00000221450 2016 ntBASIC24.49■■□□□ 1.51
Scfd1Q8BRF7 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Scfd1Q8BRF7 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
Scfd1Q8BRF7 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Scfd1Q8BRF7 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC24.48■■□□□ 1.51
Scfd1Q8BRF7 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Scfd1Q8BRF7 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC24.48■■□□□ 1.51
Scfd1Q8BRF7 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
Scfd1Q8BRF7 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC24.46■■□□□ 1.51
Scfd1Q8BRF7 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Scfd1Q8BRF7 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Scfd1Q8BRF7 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
Scfd1Q8BRF7 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC24.46■■□□□ 1.51
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms