Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cdhr3Q8BL00 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cdhr3Q8BL00 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cdhr3Q8BL00 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC18.6■□□□□ 0.57
Cdhr3Q8BL00 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC18.59■□□□□ 0.57
Cdhr3Q8BL00 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC18.59■□□□□ 0.57
Cdhr3Q8BL00 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cdhr3Q8BL00 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cdhr3Q8BL00 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cdhr3Q8BL00 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cdhr3Q8BL00 Scarna2-201ENSMUST00000157560 414 ntBASIC18.58■□□□□ 0.56
Cdhr3Q8BL00 Gm43006-201ENSMUST00000197702 1602 ntBASIC18.58■□□□□ 0.56
Cdhr3Q8BL00 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cdhr3Q8BL00 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Cdhr3Q8BL00 Gm9806-201ENSMUST00000051080 552 ntBASIC18.57■□□□□ 0.56
Cdhr3Q8BL00 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Cdhr3Q8BL00 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Cdhr3Q8BL00 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cdhr3Q8BL00 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Cdhr3Q8BL00 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cdhr3Q8BL00 Gm16437-201ENSMUST00000025669 507 ntBASIC18.56■□□□□ 0.56
Cdhr3Q8BL00 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Cdhr3Q8BL00 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cdhr3Q8BL00 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cdhr3Q8BL00 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Cdhr3Q8BL00 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cdhr3Q8BL00 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cdhr3Q8BL00 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC18.55■□□□□ 0.56
Cdhr3Q8BL00 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Cdhr3Q8BL00 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cdhr3Q8BL00 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cdhr3Q8BL00 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cdhr3Q8BL00 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cdhr3Q8BL00 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cdhr3Q8BL00 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Cdhr3Q8BL00 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Cdhr3Q8BL00 AC151971.4-201ENSMUST00000214717 704 ntBASIC18.54■□□□□ 0.56
Cdhr3Q8BL00 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cdhr3Q8BL00 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cdhr3Q8BL00 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cdhr3Q8BL00 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Cdhr3Q8BL00 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cdhr3Q8BL00 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cdhr3Q8BL00 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cdhr3Q8BL00 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Cdhr3Q8BL00 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cdhr3Q8BL00 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Cdhr3Q8BL00 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
Cdhr3Q8BL00 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Cdhr3Q8BL00 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC18.53■□□□□ 0.56
Cdhr3Q8BL00 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Cdhr3Q8BL00 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cdhr3Q8BL00 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cdhr3Q8BL00 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cdhr3Q8BL00 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cdhr3Q8BL00 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cdhr3Q8BL00 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cdhr3Q8BL00 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cdhr3Q8BL00 AC124392.1-201ENSMUST00000225172 5324 ntBASIC18.52■□□□□ 0.56
Cdhr3Q8BL00 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Cdhr3Q8BL00 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Cdhr3Q8BL00 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Cdhr3Q8BL00 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cdhr3Q8BL00 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Cdhr3Q8BL00 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Cdhr3Q8BL00 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cdhr3Q8BL00 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cdhr3Q8BL00 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC18.51■□□□□ 0.55
Cdhr3Q8BL00 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cdhr3Q8BL00 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC18.51■□□□□ 0.55
Cdhr3Q8BL00 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cdhr3Q8BL00 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cdhr3Q8BL00 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cdhr3Q8BL00 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cdhr3Q8BL00 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
Cdhr3Q8BL00 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cdhr3Q8BL00 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Cdhr3Q8BL00 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cdhr3Q8BL00 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cdhr3Q8BL00 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cdhr3Q8BL00 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cdhr3Q8BL00 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cdhr3Q8BL00 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cdhr3Q8BL00 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cdhr3Q8BL00 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cdhr3Q8BL00 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC18.49■□□□□ 0.55
Cdhr3Q8BL00 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cdhr3Q8BL00 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Cdhr3Q8BL00 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC18.48■□□□□ 0.55
Cdhr3Q8BL00 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cdhr3Q8BL00 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cdhr3Q8BL00 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Cdhr3Q8BL00 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cdhr3Q8BL00 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC18.47■□□□□ 0.55
Cdhr3Q8BL00 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC18.47■□□□□ 0.55
Cdhr3Q8BL00 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cdhr3Q8BL00 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cdhr3Q8BL00 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cdhr3Q8BL00 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cdhr3Q8BL00 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms