Protein–RNA interactions for Protein: Q8BKN6

Hs3st3a1, Heparan sulfate glucosamine 3-O-sulfotransferase 3A1, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hs3st3a1Q8BKN6 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Hs3st3a1Q8BKN6 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Hs3st3a1Q8BKN6 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Hs3st3a1Q8BKN6 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Hs3st3a1Q8BKN6 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Hs3st3a1Q8BKN6 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Hs3st3a1Q8BKN6 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Hs3st3a1Q8BKN6 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Hs3st3a1Q8BKN6 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Hs3st3a1Q8BKN6 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Hs3st3a1Q8BKN6 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC20.38■□□□□ 0.85
Hs3st3a1Q8BKN6 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Hs3st3a1Q8BKN6 Gm10620-201ENSMUST00000098379 1332 ntBASIC20.37■□□□□ 0.85
Hs3st3a1Q8BKN6 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Hs3st3a1Q8BKN6 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Hs3st3a1Q8BKN6 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Hs3st3a1Q8BKN6 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Hs3st3a1Q8BKN6 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Hs3st3a1Q8BKN6 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Hs3st3a1Q8BKN6 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Hs3st3a1Q8BKN6 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Hs3st3a1Q8BKN6 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Hs3st3a1Q8BKN6 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Hs3st3a1Q8BKN6 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Hs3st3a1Q8BKN6 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Hs3st3a1Q8BKN6 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Hs3st3a1Q8BKN6 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Hs3st3a1Q8BKN6 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Hs3st3a1Q8BKN6 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Hs3st3a1Q8BKN6 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Hs3st3a1Q8BKN6 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Hs3st3a1Q8BKN6 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Hs3st3a1Q8BKN6 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Hs3st3a1Q8BKN6 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
Hs3st3a1Q8BKN6 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.33■□□□□ 0.85
Hs3st3a1Q8BKN6 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.33■□□□□ 0.84
Hs3st3a1Q8BKN6 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Hs3st3a1Q8BKN6 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Hs3st3a1Q8BKN6 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Hs3st3a1Q8BKN6 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Hs3st3a1Q8BKN6 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Hs3st3a1Q8BKN6 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Hs3st3a1Q8BKN6 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC20.32■□□□□ 0.84
Hs3st3a1Q8BKN6 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC20.32■□□□□ 0.84
Hs3st3a1Q8BKN6 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC20.32■□□□□ 0.84
Hs3st3a1Q8BKN6 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.32■□□□□ 0.84
Hs3st3a1Q8BKN6 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Hs3st3a1Q8BKN6 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Hs3st3a1Q8BKN6 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Hs3st3a1Q8BKN6 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Hs3st3a1Q8BKN6 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
Hs3st3a1Q8BKN6 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Hs3st3a1Q8BKN6 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Hs3st3a1Q8BKN6 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Hs3st3a1Q8BKN6 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC20.31■□□□□ 0.84
Hs3st3a1Q8BKN6 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Hs3st3a1Q8BKN6 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Hs3st3a1Q8BKN6 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Hs3st3a1Q8BKN6 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Hs3st3a1Q8BKN6 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Hs3st3a1Q8BKN6 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Hs3st3a1Q8BKN6 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC20.29■□□□□ 0.84
Hs3st3a1Q8BKN6 Gm12922-201ENSMUST00000120626 809 ntBASIC20.29■□□□□ 0.84
Hs3st3a1Q8BKN6 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Hs3st3a1Q8BKN6 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC20.29■□□□□ 0.84
Hs3st3a1Q8BKN6 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC20.29■□□□□ 0.84
Hs3st3a1Q8BKN6 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Hs3st3a1Q8BKN6 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Hs3st3a1Q8BKN6 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC20.28■□□□□ 0.84
Hs3st3a1Q8BKN6 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Hs3st3a1Q8BKN6 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Hs3st3a1Q8BKN6 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Hs3st3a1Q8BKN6 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Hs3st3a1Q8BKN6 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC20.28■□□□□ 0.84
Hs3st3a1Q8BKN6 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Hs3st3a1Q8BKN6 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Hs3st3a1Q8BKN6 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Hs3st3a1Q8BKN6 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.27■□□□□ 0.84
Hs3st3a1Q8BKN6 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Hs3st3a1Q8BKN6 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Hs3st3a1Q8BKN6 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC20.27■□□□□ 0.84
Hs3st3a1Q8BKN6 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Hs3st3a1Q8BKN6 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC20.27■□□□□ 0.84
Hs3st3a1Q8BKN6 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Hs3st3a1Q8BKN6 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Hs3st3a1Q8BKN6 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Hs3st3a1Q8BKN6 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Hs3st3a1Q8BKN6 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Hs3st3a1Q8BKN6 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
Hs3st3a1Q8BKN6 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hs3st3a1Q8BKN6 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hs3st3a1Q8BKN6 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hs3st3a1Q8BKN6 AC140930.3-201ENSMUST00000222935 274 ntBASIC20.26■□□□□ 0.83
Hs3st3a1Q8BKN6 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hs3st3a1Q8BKN6 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.26■□□□□ 0.83
Hs3st3a1Q8BKN6 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Hs3st3a1Q8BKN6 AC158990.1-201ENSMUST00000221450 2016 ntBASIC20.26■□□□□ 0.83
Hs3st3a1Q8BKN6 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Hs3st3a1Q8BKN6 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Hs3st3a1Q8BKN6 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC20.25■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 64.3 ms