Protein–RNA interactions for Protein: Q6PD21

Shb, SH2 domain-containing adapter protein B, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShbQ6PD21 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
ShbQ6PD21 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
ShbQ6PD21 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
ShbQ6PD21 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
ShbQ6PD21 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
ShbQ6PD21 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
ShbQ6PD21 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
ShbQ6PD21 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
ShbQ6PD21 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC23.79■■□□□ 1.4
ShbQ6PD21 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
ShbQ6PD21 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
ShbQ6PD21 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
ShbQ6PD21 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
ShbQ6PD21 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
ShbQ6PD21 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
ShbQ6PD21 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC23.78■■□□□ 1.4
ShbQ6PD21 Gm43017-201ENSMUST00000198296 752 ntBASIC23.78■■□□□ 1.4
ShbQ6PD21 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC23.78■■□□□ 1.4
ShbQ6PD21 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
ShbQ6PD21 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
ShbQ6PD21 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
ShbQ6PD21 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
ShbQ6PD21 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
ShbQ6PD21 Gm43137-201ENSMUST00000198052 594 ntBASIC23.77■■□□□ 1.4
ShbQ6PD21 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC23.77■■□□□ 1.4
ShbQ6PD21 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC23.77■■□□□ 1.4
ShbQ6PD21 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
ShbQ6PD21 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
ShbQ6PD21 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC23.76■■□□□ 1.39
ShbQ6PD21 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC23.76■■□□□ 1.39
ShbQ6PD21 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC23.75■■□□□ 1.39
ShbQ6PD21 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC23.75■■□□□ 1.39
ShbQ6PD21 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
ShbQ6PD21 Mir7075-201ENSMUST00000184187 82 ntBASIC23.75■■□□□ 1.39
ShbQ6PD21 Gm5874-201ENSMUST00000096101 508 ntBASIC23.75■■□□□ 1.39
ShbQ6PD21 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
ShbQ6PD21 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
ShbQ6PD21 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
ShbQ6PD21 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
ShbQ6PD21 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
ShbQ6PD21 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC23.74■■□□□ 1.39
ShbQ6PD21 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC23.74■■□□□ 1.39
ShbQ6PD21 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
ShbQ6PD21 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
ShbQ6PD21 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
ShbQ6PD21 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
ShbQ6PD21 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
ShbQ6PD21 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
ShbQ6PD21 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
ShbQ6PD21 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC23.72■■□□□ 1.39
ShbQ6PD21 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
ShbQ6PD21 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
ShbQ6PD21 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
ShbQ6PD21 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
ShbQ6PD21 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
ShbQ6PD21 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC23.71■■□□□ 1.39
ShbQ6PD21 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC23.7■■□□□ 1.39
ShbQ6PD21 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
ShbQ6PD21 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
ShbQ6PD21 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
ShbQ6PD21 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
ShbQ6PD21 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
ShbQ6PD21 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC23.69■■□□□ 1.38
ShbQ6PD21 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
ShbQ6PD21 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
ShbQ6PD21 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC23.68■■□□□ 1.38
ShbQ6PD21 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
ShbQ6PD21 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC23.68■■□□□ 1.38
ShbQ6PD21 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
ShbQ6PD21 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
ShbQ6PD21 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC23.68■■□□□ 1.38
ShbQ6PD21 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
ShbQ6PD21 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
ShbQ6PD21 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
ShbQ6PD21 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
ShbQ6PD21 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC23.66■■□□□ 1.38
ShbQ6PD21 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC23.66■■□□□ 1.38
ShbQ6PD21 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
ShbQ6PD21 Gm7291-201ENSMUST00000199147 382 ntBASIC23.66■■□□□ 1.38
ShbQ6PD21 Gm9870-201ENSMUST00000063874 645 ntBASIC23.66■■□□□ 1.38
ShbQ6PD21 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
ShbQ6PD21 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC23.66■■□□□ 1.38
ShbQ6PD21 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
ShbQ6PD21 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC23.65■■□□□ 1.38
ShbQ6PD21 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
ShbQ6PD21 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
ShbQ6PD21 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
ShbQ6PD21 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
ShbQ6PD21 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.38
ShbQ6PD21 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
ShbQ6PD21 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
ShbQ6PD21 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC23.64■■□□□ 1.38
ShbQ6PD21 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
ShbQ6PD21 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
ShbQ6PD21 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
ShbQ6PD21 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.37
ShbQ6PD21 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
ShbQ6PD21 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
ShbQ6PD21 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
ShbQ6PD21 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC23.63■■□□□ 1.37
Retrieved 100 of 76,532 protein–RNA pairs in 11.9 ms