Protein–RNA interactions for Protein: Q64729

Tgfbr1, TGF-beta receptor type-1, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfbr1Q64729 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tgfbr1Q64729 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
Tgfbr1Q64729 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tgfbr1Q64729 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tgfbr1Q64729 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Tgfbr1Q64729 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tgfbr1Q64729 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tgfbr1Q64729 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Tgfbr1Q64729 Gm12504-201ENSMUST00000120860 2231 ntBASIC17.28■□□□□ 0.36
Tgfbr1Q64729 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Tgfbr1Q64729 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tgfbr1Q64729 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tgfbr1Q64729 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Tgfbr1Q64729 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Tgfbr1Q64729 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Tgfbr1Q64729 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Tgfbr1Q64729 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Tgfbr1Q64729 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Tgfbr1Q64729 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Tgfbr1Q64729 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
Tgfbr1Q64729 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC17.27■□□□□ 0.36
Tgfbr1Q64729 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Tgfbr1Q64729 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Tgfbr1Q64729 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Tgfbr1Q64729 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Tgfbr1Q64729 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tgfbr1Q64729 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tgfbr1Q64729 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tgfbr1Q64729 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tgfbr1Q64729 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tgfbr1Q64729 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tgfbr1Q64729 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tgfbr1Q64729 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tgfbr1Q64729 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tgfbr1Q64729 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Tgfbr1Q64729 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tgfbr1Q64729 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tgfbr1Q64729 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tgfbr1Q64729 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Tgfbr1Q64729 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tgfbr1Q64729 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tgfbr1Q64729 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tgfbr1Q64729 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tgfbr1Q64729 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tgfbr1Q64729 Gm6311-201ENSMUST00000073790 878 ntBASIC17.24■□□□□ 0.35
Tgfbr1Q64729 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC17.24■□□□□ 0.35
Tgfbr1Q64729 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Tgfbr1Q64729 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Tgfbr1Q64729 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
Tgfbr1Q64729 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tgfbr1Q64729 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tgfbr1Q64729 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Tgfbr1Q64729 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tgfbr1Q64729 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
Tgfbr1Q64729 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Tgfbr1Q64729 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tgfbr1Q64729 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tgfbr1Q64729 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Tgfbr1Q64729 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Tgfbr1Q64729 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC17.23■□□□□ 0.35
Tgfbr1Q64729 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Tgfbr1Q64729 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tgfbr1Q64729 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tgfbr1Q64729 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC17.22■□□□□ 0.35
Tgfbr1Q64729 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Tgfbr1Q64729 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Tgfbr1Q64729 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tgfbr1Q64729 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Tgfbr1Q64729 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tgfbr1Q64729 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tgfbr1Q64729 Gm37415-201ENSMUST00000192265 2054 ntBASIC17.21■□□□□ 0.35
Tgfbr1Q64729 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Tgfbr1Q64729 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tgfbr1Q64729 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tgfbr1Q64729 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tgfbr1Q64729 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Tgfbr1Q64729 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC17.2■□□□□ 0.34
Tgfbr1Q64729 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tgfbr1Q64729 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tgfbr1Q64729 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC17.2■□□□□ 0.34
Tgfbr1Q64729 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tgfbr1Q64729 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tgfbr1Q64729 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
Tgfbr1Q64729 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Tgfbr1Q64729 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Tgfbr1Q64729 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Tgfbr1Q64729 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC17.19■□□□□ 0.34
Tgfbr1Q64729 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Tgfbr1Q64729 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Tgfbr1Q64729 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Tgfbr1Q64729 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Tgfbr1Q64729 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Tgfbr1Q64729 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Tgfbr1Q64729 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC17.18■□□□□ 0.34
Tgfbr1Q64729 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC17.18■□□□□ 0.34
Tgfbr1Q64729 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Tgfbr1Q64729 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Tgfbr1Q64729 Gm44428-201ENSMUST00000204474 874 ntBASIC17.18■□□□□ 0.34
Tgfbr1Q64729 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Tgfbr1Q64729 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 95.1 ms