Protein–RNA interactions for Protein: Q61418

Clcn4, H(+)/Cl(-) exchange transporter 4, mousemouse

Predictions only

Length 747 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn4Q61418 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Clcn4Q61418 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Clcn4Q61418 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Clcn4Q61418 Gm32051-202ENSMUST00000197905 2385 ntBASIC19.5■□□□□ 0.71
Clcn4Q61418 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Clcn4Q61418 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Clcn4Q61418 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Clcn4Q61418 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Clcn4Q61418 Gm10420-201ENSMUST00000121713 882 ntBASIC19.5■□□□□ 0.71
Clcn4Q61418 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Clcn4Q61418 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Clcn4Q61418 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Clcn4Q61418 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Clcn4Q61418 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Clcn4Q61418 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Clcn4Q61418 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Clcn4Q61418 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Clcn4Q61418 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Clcn4Q61418 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Clcn4Q61418 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Clcn4Q61418 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC19.48■□□□□ 0.71
Clcn4Q61418 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Clcn4Q61418 AC115037.1-201ENSMUST00000223391 2173 ntBASIC19.48■□□□□ 0.71
Clcn4Q61418 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Clcn4Q61418 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Clcn4Q61418 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Clcn4Q61418 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Clcn4Q61418 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Clcn4Q61418 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Clcn4Q61418 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Clcn4Q61418 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC19.47■□□□□ 0.71
Clcn4Q61418 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC19.47■□□□□ 0.71
Clcn4Q61418 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Clcn4Q61418 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Clcn4Q61418 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Clcn4Q61418 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Clcn4Q61418 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Clcn4Q61418 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Clcn4Q61418 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Clcn4Q61418 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Clcn4Q61418 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Clcn4Q61418 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Clcn4Q61418 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Clcn4Q61418 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Clcn4Q61418 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Clcn4Q61418 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC19.45■□□□□ 0.7
Clcn4Q61418 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Clcn4Q61418 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Clcn4Q61418 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Clcn4Q61418 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.44■□□□□ 0.7
Clcn4Q61418 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Clcn4Q61418 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
Clcn4Q61418 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Clcn4Q61418 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Clcn4Q61418 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Clcn4Q61418 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Clcn4Q61418 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Clcn4Q61418 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Clcn4Q61418 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Clcn4Q61418 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Clcn4Q61418 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
Clcn4Q61418 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Clcn4Q61418 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Clcn4Q61418 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC19.43■□□□□ 0.7
Clcn4Q61418 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Clcn4Q61418 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Clcn4Q61418 AC151971.4-201ENSMUST00000214717 704 ntBASIC19.43■□□□□ 0.7
Clcn4Q61418 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Clcn4Q61418 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Clcn4Q61418 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Clcn4Q61418 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Clcn4Q61418 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Clcn4Q61418 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC19.42■□□□□ 0.7
Clcn4Q61418 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Clcn4Q61418 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Clcn4Q61418 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Clcn4Q61418 Gm38160-201ENSMUST00000193090 2499 ntBASIC19.42■□□□□ 0.7
Clcn4Q61418 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Clcn4Q61418 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC19.41■□□□□ 0.7
Clcn4Q61418 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Clcn4Q61418 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Clcn4Q61418 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Clcn4Q61418 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Clcn4Q61418 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Clcn4Q61418 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Clcn4Q61418 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Clcn4Q61418 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Clcn4Q61418 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Clcn4Q61418 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Clcn4Q61418 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Clcn4Q61418 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Clcn4Q61418 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Clcn4Q61418 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Clcn4Q61418 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Clcn4Q61418 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Clcn4Q61418 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Clcn4Q61418 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC19.39■□□□□ 0.7
Clcn4Q61418 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Clcn4Q61418 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.39■□□□□ 0.69
Clcn4Q61418 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 80.4 ms