Protein–RNA interactions for Protein: Q60611

Satb1, DNA-binding protein SATB1, mousemouse

Predictions only

Length 764 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Satb1Q60611 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Satb1Q60611 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Satb1Q60611 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Satb1Q60611 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC21.92■■□□□ 1.1
Satb1Q60611 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Satb1Q60611 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Satb1Q60611 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Satb1Q60611 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Satb1Q60611 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Satb1Q60611 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Satb1Q60611 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Satb1Q60611 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Satb1Q60611 AC164629.5-201ENSMUST00000220387 632 ntBASIC21.91■■□□□ 1.1
Satb1Q60611 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
Satb1Q60611 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC21.91■■□□□ 1.1
Satb1Q60611 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Satb1Q60611 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Satb1Q60611 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
Satb1Q60611 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Satb1Q60611 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Satb1Q60611 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC21.9■■□□□ 1.1
Satb1Q60611 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC21.9■■□□□ 1.1
Satb1Q60611 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC21.9■■□□□ 1.1
Satb1Q60611 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Satb1Q60611 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC21.9■■□□□ 1.1
Satb1Q60611 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Satb1Q60611 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Satb1Q60611 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
Satb1Q60611 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC21.89■■□□□ 1.1
Satb1Q60611 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.09
Satb1Q60611 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Satb1Q60611 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Satb1Q60611 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Satb1Q60611 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Satb1Q60611 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Satb1Q60611 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC21.88■■□□□ 1.09
Satb1Q60611 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Satb1Q60611 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
Satb1Q60611 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Satb1Q60611 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC21.88■■□□□ 1.09
Satb1Q60611 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
Satb1Q60611 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Satb1Q60611 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
Satb1Q60611 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Satb1Q60611 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Satb1Q60611 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Satb1Q60611 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Satb1Q60611 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Satb1Q60611 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Satb1Q60611 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC21.86■■□□□ 1.09
Satb1Q60611 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Satb1Q60611 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
Satb1Q60611 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Satb1Q60611 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Satb1Q60611 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Satb1Q60611 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC21.85■■□□□ 1.09
Satb1Q60611 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
Satb1Q60611 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Satb1Q60611 Gm28731-201ENSMUST00000185564 1569 ntBASIC21.85■■□□□ 1.09
Satb1Q60611 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
Satb1Q60611 Gm42699-201ENSMUST00000198104 1657 ntBASIC21.85■■□□□ 1.09
Satb1Q60611 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Satb1Q60611 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Satb1Q60611 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Satb1Q60611 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
Satb1Q60611 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Satb1Q60611 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Satb1Q60611 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
Satb1Q60611 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Satb1Q60611 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Satb1Q60611 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Satb1Q60611 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Satb1Q60611 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Satb1Q60611 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Satb1Q60611 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Satb1Q60611 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Satb1Q60611 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Satb1Q60611 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Satb1Q60611 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC21.82■■□□□ 1.08
Satb1Q60611 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC21.82■■□□□ 1.08
Satb1Q60611 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC21.82■■□□□ 1.08
Satb1Q60611 AC116713.1-201ENSMUST00000215074 430 ntBASIC21.82■■□□□ 1.08
Satb1Q60611 Golgb1-201ENSMUST00000023534 498 ntBASIC21.82■■□□□ 1.08
Satb1Q60611 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Satb1Q60611 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Satb1Q60611 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Satb1Q60611 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Satb1Q60611 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Satb1Q60611 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Satb1Q60611 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Satb1Q60611 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Satb1Q60611 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Satb1Q60611 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC21.8■■□□□ 1.08
Satb1Q60611 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC21.8■■□□□ 1.08
Satb1Q60611 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Satb1Q60611 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC21.8■■□□□ 1.08
Satb1Q60611 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Satb1Q60611 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC21.8■■□□□ 1.08
Satb1Q60611 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Satb1Q60611 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms