Protein–RNA interactions for Protein: Q5R1I9

Trav2, T cell receptor alpha variable 2 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav2Q5R1I9 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav2Q5R1I9 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC16.96■□□□□ 0.31
Trav2Q5R1I9 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav2Q5R1I9 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Trav2Q5R1I9 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav2Q5R1I9 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav2Q5R1I9 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Trav2Q5R1I9 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Trav2Q5R1I9 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav2Q5R1I9 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC16.95■□□□□ 0.3
Trav2Q5R1I9 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trav2Q5R1I9 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav2Q5R1I9 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC16.95■□□□□ 0.3
Trav2Q5R1I9 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC16.95■□□□□ 0.3
Trav2Q5R1I9 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC16.95■□□□□ 0.3
Trav2Q5R1I9 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav2Q5R1I9 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Trav2Q5R1I9 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav2Q5R1I9 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC16.94■□□□□ 0.3
Trav2Q5R1I9 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC16.94■□□□□ 0.3
Trav2Q5R1I9 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav2Q5R1I9 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav2Q5R1I9 Gm7417-201ENSMUST00000192950 473 ntBASIC16.94■□□□□ 0.3
Trav2Q5R1I9 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC16.94■□□□□ 0.3
Trav2Q5R1I9 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC16.94■□□□□ 0.3
Trav2Q5R1I9 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trav2Q5R1I9 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav2Q5R1I9 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav2Q5R1I9 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav2Q5R1I9 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav2Q5R1I9 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trav2Q5R1I9 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Trav2Q5R1I9 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Trav2Q5R1I9 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav2Q5R1I9 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav2Q5R1I9 Gm8093-201ENSMUST00000128935 1892 ntBASIC16.93■□□□□ 0.3
Trav2Q5R1I9 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trav2Q5R1I9 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav2Q5R1I9 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav2Q5R1I9 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Trav2Q5R1I9 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav2Q5R1I9 Gm10399-202ENSMUST00000202768 748 ntBASIC16.92■□□□□ 0.3
Trav2Q5R1I9 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav2Q5R1I9 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav2Q5R1I9 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav2Q5R1I9 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Trav2Q5R1I9 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav2Q5R1I9 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Trav2Q5R1I9 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav2Q5R1I9 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trav2Q5R1I9 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC16.91■□□□□ 0.3
Trav2Q5R1I9 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC16.91■□□□□ 0.3
Trav2Q5R1I9 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC16.91■□□□□ 0.3
Trav2Q5R1I9 Gm40881-201ENSMUST00000223397 166 ntBASIC16.91■□□□□ 0.3
Trav2Q5R1I9 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav2Q5R1I9 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC16.91■□□□□ 0.3
Trav2Q5R1I9 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav2Q5R1I9 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC16.9■□□□□ 0.3
Trav2Q5R1I9 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
Trav2Q5R1I9 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC16.9■□□□□ 0.3
Trav2Q5R1I9 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC16.9■□□□□ 0.3
Trav2Q5R1I9 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav2Q5R1I9 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav2Q5R1I9 Il17rd-202ENSMUST00000223942 2186 ntBASIC16.89■□□□□ 0.3
Trav2Q5R1I9 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trav2Q5R1I9 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
Trav2Q5R1I9 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trav2Q5R1I9 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC16.89■□□□□ 0.29
Trav2Q5R1I9 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC16.89■□□□□ 0.29
Trav2Q5R1I9 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC16.89■□□□□ 0.29
Trav2Q5R1I9 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav2Q5R1I9 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trav2Q5R1I9 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav2Q5R1I9 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav2Q5R1I9 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Trav2Q5R1I9 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Trav2Q5R1I9 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav2Q5R1I9 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav2Q5R1I9 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav2Q5R1I9 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav2Q5R1I9 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav2Q5R1I9 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC16.88■□□□□ 0.29
Trav2Q5R1I9 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav2Q5R1I9 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trav2Q5R1I9 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav2Q5R1I9 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav2Q5R1I9 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav2Q5R1I9 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav2Q5R1I9 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav2Q5R1I9 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trav2Q5R1I9 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav2Q5R1I9 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
Trav2Q5R1I9 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trav2Q5R1I9 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav2Q5R1I9 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC16.86■□□□□ 0.29
Trav2Q5R1I9 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC16.86■□□□□ 0.29
Trav2Q5R1I9 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav2Q5R1I9 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav2Q5R1I9 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav2Q5R1I9 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms