Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC17.95■□□□□ 0.46
Trav6d-4Q5R1I0 Gm9959-201ENSMUST00000068277 390 ntBASIC17.95■□□□□ 0.46
Trav6d-4Q5R1I0 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav6d-4Q5R1I0 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trav6d-4Q5R1I0 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav6d-4Q5R1I0 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav6d-4Q5R1I0 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav6d-4Q5R1I0 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC17.94■□□□□ 0.46
Trav6d-4Q5R1I0 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC17.94■□□□□ 0.46
Trav6d-4Q5R1I0 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav6d-4Q5R1I0 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Trav6d-4Q5R1I0 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav6d-4Q5R1I0 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trav6d-4Q5R1I0 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav6d-4Q5R1I0 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav6d-4Q5R1I0 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav6d-4Q5R1I0 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav6d-4Q5R1I0 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav6d-4Q5R1I0 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav6d-4Q5R1I0 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC17.93■□□□□ 0.46
Trav6d-4Q5R1I0 Gm45102-201ENSMUST00000207427 857 ntBASIC17.93■□□□□ 0.46
Trav6d-4Q5R1I0 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Trav6d-4Q5R1I0 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav6d-4Q5R1I0 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Trav6d-4Q5R1I0 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav6d-4Q5R1I0 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav6d-4Q5R1I0 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav6d-4Q5R1I0 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC17.92■□□□□ 0.46
Trav6d-4Q5R1I0 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC17.92■□□□□ 0.46
Trav6d-4Q5R1I0 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC17.92■□□□□ 0.46
Trav6d-4Q5R1I0 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav6d-4Q5R1I0 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav6d-4Q5R1I0 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC17.92■□□□□ 0.46
Trav6d-4Q5R1I0 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav6d-4Q5R1I0 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav6d-4Q5R1I0 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav6d-4Q5R1I0 AC115037.1-201ENSMUST00000223391 2173 ntBASIC17.91■□□□□ 0.46
Trav6d-4Q5R1I0 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav6d-4Q5R1I0 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav6d-4Q5R1I0 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav6d-4Q5R1I0 Gm14117-201ENSMUST00000122417 843 ntBASIC17.91■□□□□ 0.46
Trav6d-4Q5R1I0 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trav6d-4Q5R1I0 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Trav6d-4Q5R1I0 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Trav6d-4Q5R1I0 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trav6d-4Q5R1I0 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav6d-4Q5R1I0 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC17.9■□□□□ 0.46
Trav6d-4Q5R1I0 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav6d-4Q5R1I0 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav6d-4Q5R1I0 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav6d-4Q5R1I0 Etf1-202ENSMUST00000180351 108 ntBASIC17.9■□□□□ 0.46
Trav6d-4Q5R1I0 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC17.9■□□□□ 0.46
Trav6d-4Q5R1I0 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav6d-4Q5R1I0 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
Trav6d-4Q5R1I0 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trav6d-4Q5R1I0 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC17.89■□□□□ 0.45
Trav6d-4Q5R1I0 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trav6d-4Q5R1I0 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC17.89■□□□□ 0.45
Trav6d-4Q5R1I0 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Trav6d-4Q5R1I0 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav6d-4Q5R1I0 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav6d-4Q5R1I0 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
Trav6d-4Q5R1I0 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav6d-4Q5R1I0 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC17.88■□□□□ 0.45
Trav6d-4Q5R1I0 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC17.88■□□□□ 0.45
Trav6d-4Q5R1I0 Gm5131-201ENSMUST00000212776 1238 ntBASIC17.88■□□□□ 0.45
Trav6d-4Q5R1I0 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav6d-4Q5R1I0 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav6d-4Q5R1I0 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Trav6d-4Q5R1I0 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav6d-4Q5R1I0 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav6d-4Q5R1I0 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Trav6d-4Q5R1I0 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC17.87■□□□□ 0.45
Trav6d-4Q5R1I0 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC17.87■□□□□ 0.45
Trav6d-4Q5R1I0 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC17.87■□□□□ 0.45
Trav6d-4Q5R1I0 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav6d-4Q5R1I0 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav6d-4Q5R1I0 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav6d-4Q5R1I0 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav6d-4Q5R1I0 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Trav6d-4Q5R1I0 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav6d-4Q5R1I0 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav6d-4Q5R1I0 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC17.85■□□□□ 0.45
Trav6d-4Q5R1I0 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Trav6d-4Q5R1I0 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trav6d-4Q5R1I0 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Trav6d-4Q5R1I0 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trav6d-4Q5R1I0 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trav6d-4Q5R1I0 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trav6d-4Q5R1I0 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC17.85■□□□□ 0.45
Trav6d-4Q5R1I0 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trav6d-4Q5R1I0 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC17.84■□□□□ 0.45
Trav6d-4Q5R1I0 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav6d-4Q5R1I0 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC17.84■□□□□ 0.45
Trav6d-4Q5R1I0 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav6d-4Q5R1I0 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
Trav6d-4Q5R1I0 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trav6d-4Q5R1I0 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav6d-4Q5R1I0 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav6d-4Q5R1I0 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC17.84■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms