Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Rnf20Q5DTM8 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC25.4■■□□□ 1.66
Rnf20Q5DTM8 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC25.4■■□□□ 1.66
Rnf20Q5DTM8 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC25.4■■□□□ 1.66
Rnf20Q5DTM8 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Rnf20Q5DTM8 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
Rnf20Q5DTM8 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Rnf20Q5DTM8 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Rnf20Q5DTM8 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Rnf20Q5DTM8 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
Rnf20Q5DTM8 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
Rnf20Q5DTM8 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC25.39■■□□□ 1.66
Rnf20Q5DTM8 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC25.39■■□□□ 1.65
Rnf20Q5DTM8 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
Rnf20Q5DTM8 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
Rnf20Q5DTM8 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC25.38■■□□□ 1.65
Rnf20Q5DTM8 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC25.38■■□□□ 1.65
Rnf20Q5DTM8 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
Rnf20Q5DTM8 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Rnf20Q5DTM8 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC25.38■■□□□ 1.65
Rnf20Q5DTM8 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Rnf20Q5DTM8 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC25.37■■□□□ 1.65
Rnf20Q5DTM8 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Rnf20Q5DTM8 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC25.37■■□□□ 1.65
Rnf20Q5DTM8 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
Rnf20Q5DTM8 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC25.36■■□□□ 1.65
Rnf20Q5DTM8 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Rnf20Q5DTM8 Dmtn-209ENSMUST00000228295 2572 ntBASIC25.36■■□□□ 1.65
Rnf20Q5DTM8 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC25.35■■□□□ 1.65
Rnf20Q5DTM8 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
Rnf20Q5DTM8 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
Rnf20Q5DTM8 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC25.35■■□□□ 1.65
Rnf20Q5DTM8 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC25.35■■□□□ 1.65
Rnf20Q5DTM8 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC25.35■■□□□ 1.65
Rnf20Q5DTM8 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC25.34■■□□□ 1.65
Rnf20Q5DTM8 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Rnf20Q5DTM8 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC25.34■■□□□ 1.65
Rnf20Q5DTM8 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC25.34■■□□□ 1.65
Rnf20Q5DTM8 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC25.34■■□□□ 1.65
Rnf20Q5DTM8 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Rnf20Q5DTM8 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
Rnf20Q5DTM8 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
Rnf20Q5DTM8 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC25.33■■□□□ 1.65
Rnf20Q5DTM8 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC25.33■■□□□ 1.65
Rnf20Q5DTM8 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Rnf20Q5DTM8 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC25.33■■□□□ 1.65
Rnf20Q5DTM8 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
Rnf20Q5DTM8 Gm42418-201ENSMUST00000182010 1831 ntBASIC25.33■■□□□ 1.64
Rnf20Q5DTM8 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC25.32■■□□□ 1.64
Rnf20Q5DTM8 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Rnf20Q5DTM8 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC25.32■■□□□ 1.64
Rnf20Q5DTM8 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Rnf20Q5DTM8 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Rnf20Q5DTM8 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC25.31■■□□□ 1.64
Rnf20Q5DTM8 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Rnf20Q5DTM8 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC25.31■■□□□ 1.64
Rnf20Q5DTM8 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC25.31■■□□□ 1.64
Rnf20Q5DTM8 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
Rnf20Q5DTM8 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Rnf20Q5DTM8 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC25.3■■□□□ 1.64
Rnf20Q5DTM8 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Rnf20Q5DTM8 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC25.3■■□□□ 1.64
Rnf20Q5DTM8 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
Rnf20Q5DTM8 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
Rnf20Q5DTM8 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC25.29■■□□□ 1.64
Rnf20Q5DTM8 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC25.29■■□□□ 1.64
Rnf20Q5DTM8 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Rnf20Q5DTM8 Gm37415-201ENSMUST00000192265 2054 ntBASIC25.29■■□□□ 1.64
Rnf20Q5DTM8 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC25.29■■□□□ 1.64
Rnf20Q5DTM8 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
Rnf20Q5DTM8 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Rnf20Q5DTM8 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Rnf20Q5DTM8 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Rnf20Q5DTM8 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Rnf20Q5DTM8 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC25.27■■□□□ 1.64
Rnf20Q5DTM8 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC25.27■■□□□ 1.64
Rnf20Q5DTM8 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC25.27■■□□□ 1.64
Rnf20Q5DTM8 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC25.27■■□□□ 1.64
Rnf20Q5DTM8 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC25.27■■□□□ 1.64
Rnf20Q5DTM8 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Rnf20Q5DTM8 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC25.26■■□□□ 1.63
Rnf20Q5DTM8 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC25.26■■□□□ 1.63
Rnf20Q5DTM8 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC25.26■■□□□ 1.63
Rnf20Q5DTM8 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC25.26■■□□□ 1.63
Rnf20Q5DTM8 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
Rnf20Q5DTM8 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
Rnf20Q5DTM8 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC25.26■■□□□ 1.63
Rnf20Q5DTM8 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Rnf20Q5DTM8 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Rnf20Q5DTM8 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC25.25■■□□□ 1.63
Rnf20Q5DTM8 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC25.25■■□□□ 1.63
Rnf20Q5DTM8 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
Rnf20Q5DTM8 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Rnf20Q5DTM8 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC25.25■■□□□ 1.63
Rnf20Q5DTM8 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC25.25■■□□□ 1.63
Rnf20Q5DTM8 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Rnf20Q5DTM8 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
Rnf20Q5DTM8 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Rnf20Q5DTM8 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Rnf20Q5DTM8 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC25.24■■□□□ 1.63
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms