Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Trim40Q3UWA4 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Trim40Q3UWA4 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Trim40Q3UWA4 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC19.93■□□□□ 0.78
Trim40Q3UWA4 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Trim40Q3UWA4 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Trim40Q3UWA4 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Trim40Q3UWA4 Gm13889-201ENSMUST00000099689 1386 ntBASIC19.92■□□□□ 0.78
Trim40Q3UWA4 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim40Q3UWA4 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Trim40Q3UWA4 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim40Q3UWA4 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Trim40Q3UWA4 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim40Q3UWA4 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim40Q3UWA4 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Trim40Q3UWA4 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC19.91■□□□□ 0.78
Trim40Q3UWA4 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim40Q3UWA4 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC19.91■□□□□ 0.78
Trim40Q3UWA4 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Trim40Q3UWA4 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim40Q3UWA4 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Trim40Q3UWA4 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim40Q3UWA4 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC19.91■□□□□ 0.78
Trim40Q3UWA4 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Trim40Q3UWA4 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Trim40Q3UWA4 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim40Q3UWA4 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim40Q3UWA4 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Trim40Q3UWA4 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim40Q3UWA4 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim40Q3UWA4 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC19.89■□□□□ 0.78
Trim40Q3UWA4 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trim40Q3UWA4 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Trim40Q3UWA4 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Trim40Q3UWA4 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Trim40Q3UWA4 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trim40Q3UWA4 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC19.89■□□□□ 0.77
Trim40Q3UWA4 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC19.89■□□□□ 0.77
Trim40Q3UWA4 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trim40Q3UWA4 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trim40Q3UWA4 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trim40Q3UWA4 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Trim40Q3UWA4 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim40Q3UWA4 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim40Q3UWA4 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC19.88■□□□□ 0.77
Trim40Q3UWA4 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Trim40Q3UWA4 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim40Q3UWA4 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Trim40Q3UWA4 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim40Q3UWA4 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim40Q3UWA4 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim40Q3UWA4 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim40Q3UWA4 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC19.87■□□□□ 0.77
Trim40Q3UWA4 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim40Q3UWA4 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Trim40Q3UWA4 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC19.86■□□□□ 0.77
Trim40Q3UWA4 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim40Q3UWA4 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim40Q3UWA4 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim40Q3UWA4 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim40Q3UWA4 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim40Q3UWA4 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim40Q3UWA4 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim40Q3UWA4 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim40Q3UWA4 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim40Q3UWA4 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Trim40Q3UWA4 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim40Q3UWA4 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim40Q3UWA4 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC19.84■□□□□ 0.77
Trim40Q3UWA4 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim40Q3UWA4 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC19.84■□□□□ 0.77
Trim40Q3UWA4 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Trim40Q3UWA4 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim40Q3UWA4 AC117245.4-201ENSMUST00000217388 1646 ntBASIC19.84■□□□□ 0.77
Trim40Q3UWA4 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trim40Q3UWA4 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trim40Q3UWA4 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Trim40Q3UWA4 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Trim40Q3UWA4 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
Trim40Q3UWA4 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim40Q3UWA4 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim40Q3UWA4 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim40Q3UWA4 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim40Q3UWA4 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Trim40Q3UWA4 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim40Q3UWA4 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim40Q3UWA4 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim40Q3UWA4 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim40Q3UWA4 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim40Q3UWA4 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Trim40Q3UWA4 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim40Q3UWA4 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Trim40Q3UWA4 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim40Q3UWA4 Gm9812-201ENSMUST00000061934 968 ntBASIC19.81■□□□□ 0.76
Trim40Q3UWA4 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.81■□□□□ 0.76
Trim40Q3UWA4 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC19.81■□□□□ 0.76
Trim40Q3UWA4 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trim40Q3UWA4 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trim40Q3UWA4 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Trim40Q3UWA4 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms