Protein–RNA interactions for Protein: Q3KNJ2

Nhej1, Non-homologous end-joining factor 1, mousemouse

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhej1Q3KNJ2 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Nhej1Q3KNJ2 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Nhej1Q3KNJ2 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Nhej1Q3KNJ2 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Nhej1Q3KNJ2 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
Nhej1Q3KNJ2 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Nhej1Q3KNJ2 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC22.68■■□□□ 1.22
Nhej1Q3KNJ2 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Nhej1Q3KNJ2 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC22.67■■□□□ 1.22
Nhej1Q3KNJ2 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
Nhej1Q3KNJ2 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Nhej1Q3KNJ2 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Nhej1Q3KNJ2 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
Nhej1Q3KNJ2 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Nhej1Q3KNJ2 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
Nhej1Q3KNJ2 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Nhej1Q3KNJ2 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Nhej1Q3KNJ2 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC22.66■■□□□ 1.22
Nhej1Q3KNJ2 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Nhej1Q3KNJ2 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
Nhej1Q3KNJ2 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Nhej1Q3KNJ2 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
Nhej1Q3KNJ2 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC22.66■■□□□ 1.22
Nhej1Q3KNJ2 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Nhej1Q3KNJ2 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
Nhej1Q3KNJ2 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Nhej1Q3KNJ2 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Nhej1Q3KNJ2 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Nhej1Q3KNJ2 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Nhej1Q3KNJ2 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC22.65■■□□□ 1.22
Nhej1Q3KNJ2 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Nhej1Q3KNJ2 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Nhej1Q3KNJ2 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Nhej1Q3KNJ2 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Nhej1Q3KNJ2 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
Nhej1Q3KNJ2 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Nhej1Q3KNJ2 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
Nhej1Q3KNJ2 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.22
Nhej1Q3KNJ2 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.22
Nhej1Q3KNJ2 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Nhej1Q3KNJ2 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC22.64■■□□□ 1.21
Nhej1Q3KNJ2 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Nhej1Q3KNJ2 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Nhej1Q3KNJ2 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Nhej1Q3KNJ2 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Nhej1Q3KNJ2 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Nhej1Q3KNJ2 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Nhej1Q3KNJ2 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Nhej1Q3KNJ2 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
Nhej1Q3KNJ2 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
Nhej1Q3KNJ2 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Nhej1Q3KNJ2 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Nhej1Q3KNJ2 Gm11687-201ENSMUST00000118911 886 ntBASIC22.62■■□□□ 1.21
Nhej1Q3KNJ2 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC22.62■■□□□ 1.21
Nhej1Q3KNJ2 AC151971.4-201ENSMUST00000214717 704 ntBASIC22.62■■□□□ 1.21
Nhej1Q3KNJ2 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Nhej1Q3KNJ2 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Nhej1Q3KNJ2 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Nhej1Q3KNJ2 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Nhej1Q3KNJ2 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Nhej1Q3KNJ2 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Nhej1Q3KNJ2 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
Nhej1Q3KNJ2 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
Nhej1Q3KNJ2 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC22.61■■□□□ 1.21
Nhej1Q3KNJ2 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Nhej1Q3KNJ2 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Nhej1Q3KNJ2 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC22.6■■□□□ 1.21
Nhej1Q3KNJ2 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC22.6■■□□□ 1.21
Nhej1Q3KNJ2 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Nhej1Q3KNJ2 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Nhej1Q3KNJ2 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Nhej1Q3KNJ2 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Nhej1Q3KNJ2 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Nhej1Q3KNJ2 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Nhej1Q3KNJ2 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC22.59■■□□□ 1.21
Nhej1Q3KNJ2 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Nhej1Q3KNJ2 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Nhej1Q3KNJ2 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Nhej1Q3KNJ2 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC22.59■■□□□ 1.21
Nhej1Q3KNJ2 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Nhej1Q3KNJ2 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Nhej1Q3KNJ2 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Nhej1Q3KNJ2 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Nhej1Q3KNJ2 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Nhej1Q3KNJ2 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Nhej1Q3KNJ2 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Nhej1Q3KNJ2 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.2
Nhej1Q3KNJ2 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Nhej1Q3KNJ2 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Nhej1Q3KNJ2 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Nhej1Q3KNJ2 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Nhej1Q3KNJ2 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Nhej1Q3KNJ2 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Nhej1Q3KNJ2 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Nhej1Q3KNJ2 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Nhej1Q3KNJ2 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Nhej1Q3KNJ2 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
Nhej1Q3KNJ2 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
Nhej1Q3KNJ2 Gm43403-201ENSMUST00000198011 1786 ntBASIC22.56■■□□□ 1.2
Nhej1Q3KNJ2 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC22.56■■□□□ 1.2
Retrieved 100 of 76,532 protein–RNA pairs in 119.2 ms