Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
H3f3aP84244 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC19■□□□□ 0.63
H3f3aP84244 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC19■□□□□ 0.63
H3f3aP84244 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
H3f3aP84244 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC19■□□□□ 0.63
H3f3aP84244 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC19■□□□□ 0.63
H3f3aP84244 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC19■□□□□ 0.63
H3f3aP84244 AC153962.1-201ENSMUST00000218530 1948 ntBASIC19■□□□□ 0.63
H3f3aP84244 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
H3f3aP84244 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC18.99■□□□□ 0.63
H3f3aP84244 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC18.99■□□□□ 0.63
H3f3aP84244 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
H3f3aP84244 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC18.98■□□□□ 0.63
H3f3aP84244 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
H3f3aP84244 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
H3f3aP84244 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC18.98■□□□□ 0.63
H3f3aP84244 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
H3f3aP84244 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
H3f3aP84244 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
H3f3aP84244 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
H3f3aP84244 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
H3f3aP84244 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
H3f3aP84244 Gm17641-201ENSMUST00000166328 2350 ntBASIC18.97■□□□□ 0.63
H3f3aP84244 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC18.97■□□□□ 0.63
H3f3aP84244 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC18.97■□□□□ 0.63
H3f3aP84244 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
H3f3aP84244 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
H3f3aP84244 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
H3f3aP84244 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
H3f3aP84244 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
H3f3aP84244 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC18.97■□□□□ 0.63
H3f3aP84244 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
H3f3aP84244 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
H3f3aP84244 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
H3f3aP84244 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
H3f3aP84244 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
H3f3aP84244 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
H3f3aP84244 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
H3f3aP84244 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
H3f3aP84244 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
H3f3aP84244 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
H3f3aP84244 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
H3f3aP84244 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
H3f3aP84244 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC18.95■□□□□ 0.62
H3f3aP84244 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
H3f3aP84244 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
H3f3aP84244 Gm28536-201ENSMUST00000190971 1317 ntBASIC18.95■□□□□ 0.62
H3f3aP84244 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
H3f3aP84244 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
H3f3aP84244 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
H3f3aP84244 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
H3f3aP84244 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
H3f3aP84244 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
H3f3aP84244 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
H3f3aP84244 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
H3f3aP84244 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC18.93■□□□□ 0.62
H3f3aP84244 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
H3f3aP84244 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
H3f3aP84244 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
H3f3aP84244 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC18.93■□□□□ 0.62
H3f3aP84244 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
H3f3aP84244 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
H3f3aP84244 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
H3f3aP84244 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
H3f3aP84244 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
H3f3aP84244 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC18.92■□□□□ 0.62
H3f3aP84244 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC18.92■□□□□ 0.62
H3f3aP84244 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
H3f3aP84244 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
H3f3aP84244 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
H3f3aP84244 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC18.92■□□□□ 0.62
H3f3aP84244 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
H3f3aP84244 Gm20634-201ENSMUST00000090779 2956 ntBASIC18.91■□□□□ 0.62
H3f3aP84244 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
H3f3aP84244 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
H3f3aP84244 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
H3f3aP84244 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
H3f3aP84244 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
H3f3aP84244 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
H3f3aP84244 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
H3f3aP84244 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
H3f3aP84244 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC18.91■□□□□ 0.62
H3f3aP84244 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC18.91■□□□□ 0.62
H3f3aP84244 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
H3f3aP84244 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
H3f3aP84244 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
H3f3aP84244 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
H3f3aP84244 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
H3f3aP84244 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
H3f3aP84244 Gm16464-201ENSMUST00000117815 1095 ntBASIC18.9■□□□□ 0.62
H3f3aP84244 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC18.9■□□□□ 0.62
H3f3aP84244 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC18.9■□□□□ 0.62
H3f3aP84244 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
H3f3aP84244 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
H3f3aP84244 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
H3f3aP84244 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
H3f3aP84244 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
H3f3aP84244 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
H3f3aP84244 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC18.89■□□□□ 0.62
H3f3aP84244 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 14.8 ms