Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Lsm6P62313 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Lsm6P62313 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Lsm6P62313 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Lsm6P62313 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Lsm6P62313 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Lsm6P62313 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC18.7■□□□□ 0.58
Lsm6P62313 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Lsm6P62313 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Lsm6P62313 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
Lsm6P62313 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
Lsm6P62313 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Lsm6P62313 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Lsm6P62313 Gm5067-201ENSMUST00000170449 1009 ntBASIC18.69■□□□□ 0.58
Lsm6P62313 Gm42418-201ENSMUST00000182010 1831 ntBASIC18.69■□□□□ 0.58
Lsm6P62313 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Lsm6P62313 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC18.69■□□□□ 0.58
Lsm6P62313 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC18.68■□□□□ 0.58
Lsm6P62313 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Lsm6P62313 Dmtn-209ENSMUST00000228295 2572 ntBASIC18.68■□□□□ 0.58
Lsm6P62313 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
Lsm6P62313 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Lsm6P62313 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Lsm6P62313 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Lsm6P62313 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Lsm6P62313 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC18.67■□□□□ 0.58
Lsm6P62313 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
Lsm6P62313 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Lsm6P62313 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC18.67■□□□□ 0.58
Lsm6P62313 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Lsm6P62313 Cap2-205ENSMUST00000225824 1634 ntBASIC18.67■□□□□ 0.58
Lsm6P62313 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Lsm6P62313 Gm37415-201ENSMUST00000192265 2054 ntBASIC18.66■□□□□ 0.58
Lsm6P62313 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lsm6P62313 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Lsm6P62313 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Lsm6P62313 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Lsm6P62313 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Lsm6P62313 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Lsm6P62313 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Lsm6P62313 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Lsm6P62313 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Lsm6P62313 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Lsm6P62313 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Lsm6P62313 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Lsm6P62313 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Lsm6P62313 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Lsm6P62313 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC18.64■□□□□ 0.57
Lsm6P62313 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Lsm6P62313 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Lsm6P62313 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Lsm6P62313 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Lsm6P62313 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC18.64■□□□□ 0.57
Lsm6P62313 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Lsm6P62313 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Lsm6P62313 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Lsm6P62313 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Lsm6P62313 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Lsm6P62313 Gm13042-201ENSMUST00000119244 1955 ntBASIC18.63■□□□□ 0.57
Lsm6P62313 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Lsm6P62313 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC18.63■□□□□ 0.57
Lsm6P62313 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC18.63■□□□□ 0.57
Lsm6P62313 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Lsm6P62313 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Lsm6P62313 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lsm6P62313 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lsm6P62313 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lsm6P62313 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Lsm6P62313 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Lsm6P62313 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Lsm6P62313 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
Lsm6P62313 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lsm6P62313 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Lsm6P62313 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Lsm6P62313 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Lsm6P62313 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC18.61■□□□□ 0.57
Lsm6P62313 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Lsm6P62313 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Lsm6P62313 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Lsm6P62313 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Lsm6P62313 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Lsm6P62313 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Lsm6P62313 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Lsm6P62313 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Lsm6P62313 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Lsm6P62313 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Lsm6P62313 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Lsm6P62313 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Lsm6P62313 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Lsm6P62313 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Lsm6P62313 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Lsm6P62313 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Lsm6P62313 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC18.59■□□□□ 0.57
Lsm6P62313 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Lsm6P62313 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Lsm6P62313 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Lsm6P62313 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Lsm6P62313 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Lsm6P62313 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Lsm6P62313 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC18.58■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 14.8 ms