Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
NcanP55066 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
NcanP55066 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
NcanP55066 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
NcanP55066 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC23.14■■□□□ 1.29
NcanP55066 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC23.14■■□□□ 1.29
NcanP55066 Gm21168-201ENSMUST00000199646 1096 ntBASIC23.14■■□□□ 1.29
NcanP55066 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
NcanP55066 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
NcanP55066 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
NcanP55066 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC23.13■■□□□ 1.29
NcanP55066 Gm43017-201ENSMUST00000198296 752 ntBASIC23.13■■□□□ 1.29
NcanP55066 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
NcanP55066 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
NcanP55066 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
NcanP55066 Gm5874-201ENSMUST00000096101 508 ntBASIC23.12■■□□□ 1.29
NcanP55066 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
NcanP55066 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
NcanP55066 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
NcanP55066 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC23.11■■□□□ 1.29
NcanP55066 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
NcanP55066 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
NcanP55066 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC23.11■■□□□ 1.29
NcanP55066 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
NcanP55066 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
NcanP55066 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
NcanP55066 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
NcanP55066 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC23.1■■□□□ 1.29
NcanP55066 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC23.1■■□□□ 1.29
NcanP55066 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
NcanP55066 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
NcanP55066 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
NcanP55066 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
NcanP55066 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
NcanP55066 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
NcanP55066 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC23.09■■□□□ 1.29
NcanP55066 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
NcanP55066 CT025689.6-201ENSMUST00000224991 1104 ntBASIC23.09■■□□□ 1.29
NcanP55066 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
NcanP55066 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
NcanP55066 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
NcanP55066 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC23.08■■□□□ 1.29
NcanP55066 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
NcanP55066 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
NcanP55066 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
NcanP55066 Gm26571-201ENSMUST00000181399 666 ntBASIC23.07■■□□□ 1.28
NcanP55066 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
NcanP55066 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
NcanP55066 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
NcanP55066 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
NcanP55066 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
NcanP55066 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
NcanP55066 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC23.06■■□□□ 1.28
NcanP55066 Gm43137-201ENSMUST00000198052 594 ntBASIC23.06■■□□□ 1.28
NcanP55066 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
NcanP55066 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
NcanP55066 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
NcanP55066 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
NcanP55066 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
NcanP55066 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
NcanP55066 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
NcanP55066 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
NcanP55066 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
NcanP55066 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC23.04■■□□□ 1.28
NcanP55066 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC23.04■■□□□ 1.28
NcanP55066 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
NcanP55066 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC23.04■■□□□ 1.28
NcanP55066 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
NcanP55066 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
NcanP55066 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
NcanP55066 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC23.03■■□□□ 1.28
NcanP55066 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
NcanP55066 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
NcanP55066 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
NcanP55066 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC23.02■■□□□ 1.28
NcanP55066 Mir7075-201ENSMUST00000184187 82 ntBASIC23.02■■□□□ 1.28
NcanP55066 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC23.02■■□□□ 1.28
NcanP55066 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
NcanP55066 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
NcanP55066 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC23.01■■□□□ 1.27
NcanP55066 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
NcanP55066 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
NcanP55066 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
NcanP55066 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC22.99■■□□□ 1.27
NcanP55066 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
NcanP55066 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC22.98■■□□□ 1.27
NcanP55066 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
NcanP55066 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
NcanP55066 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC22.98■■□□□ 1.27
NcanP55066 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
NcanP55066 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
NcanP55066 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
NcanP55066 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC22.98■■□□□ 1.27
NcanP55066 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC22.98■■□□□ 1.27
NcanP55066 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC22.97■■□□□ 1.27
NcanP55066 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
NcanP55066 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC22.97■■□□□ 1.27
NcanP55066 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
NcanP55066 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
NcanP55066 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Retrieved 100 of 76,532 protein–RNA pairs in 267.9 ms