Protein–RNA interactions for Protein: P47993

Xcl1, Lymphotactin, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xcl1P47993 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Xcl1P47993 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Xcl1P47993 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Xcl1P47993 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Xcl1P47993 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Xcl1P47993 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Xcl1P47993 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC14□□□□□ -0.17
Xcl1P47993 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Xcl1P47993 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Xcl1P47993 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC14□□□□□ -0.17
Xcl1P47993 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC14□□□□□ -0.17
Xcl1P47993 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Xcl1P47993 Gm8093-201ENSMUST00000128935 1892 ntBASIC13.99□□□□□ -0.17
Xcl1P47993 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Xcl1P47993 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Xcl1P47993 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Xcl1P47993 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Xcl1P47993 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Xcl1P47993 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Xcl1P47993 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Xcl1P47993 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Xcl1P47993 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Xcl1P47993 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Xcl1P47993 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Xcl1P47993 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC13.98□□□□□ -0.17
Xcl1P47993 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Xcl1P47993 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Xcl1P47993 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Xcl1P47993 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC13.98□□□□□ -0.17
Xcl1P47993 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Xcl1P47993 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Xcl1P47993 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Xcl1P47993 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC13.97□□□□□ -0.17
Xcl1P47993 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Xcl1P47993 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Xcl1P47993 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Xcl1P47993 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Xcl1P47993 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Xcl1P47993 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Xcl1P47993 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Xcl1P47993 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Xcl1P47993 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Xcl1P47993 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Xcl1P47993 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Xcl1P47993 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Xcl1P47993 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC13.97□□□□□ -0.17
Xcl1P47993 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Xcl1P47993 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Xcl1P47993 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Xcl1P47993 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Xcl1P47993 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Xcl1P47993 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Xcl1P47993 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Xcl1P47993 AC153962.1-201ENSMUST00000218530 1948 ntBASIC13.96□□□□□ -0.17
Xcl1P47993 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Xcl1P47993 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Xcl1P47993 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Xcl1P47993 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Xcl1P47993 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC13.96□□□□□ -0.17
Xcl1P47993 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Xcl1P47993 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC13.96□□□□□ -0.17
Xcl1P47993 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Xcl1P47993 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Xcl1P47993 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
Xcl1P47993 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Xcl1P47993 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Xcl1P47993 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
Xcl1P47993 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Xcl1P47993 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Xcl1P47993 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Xcl1P47993 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Xcl1P47993 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
Xcl1P47993 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Xcl1P47993 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Xcl1P47993 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Xcl1P47993 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Xcl1P47993 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
Xcl1P47993 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Xcl1P47993 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Xcl1P47993 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Xcl1P47993 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Xcl1P47993 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Xcl1P47993 Gm34220-201ENSMUST00000223001 2709 ntBASIC13.94□□□□□ -0.18
Xcl1P47993 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Xcl1P47993 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Xcl1P47993 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Xcl1P47993 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Xcl1P47993 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Xcl1P47993 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Xcl1P47993 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Xcl1P47993 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Xcl1P47993 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Xcl1P47993 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Xcl1P47993 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Xcl1P47993 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Xcl1P47993 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Xcl1P47993 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Xcl1P47993 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Xcl1P47993 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Xcl1P47993 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 13.6 ms