Protein–RNA interactions for Protein: P0C6B2

Ptcra, Pre T-cell antigen receptor alpha, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PtcraP0C6B2 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PtcraP0C6B2 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
PtcraP0C6B2 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PtcraP0C6B2 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
PtcraP0C6B2 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
PtcraP0C6B2 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
PtcraP0C6B2 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC18.55■□□□□ 0.56
PtcraP0C6B2 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PtcraP0C6B2 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC18.54■□□□□ 0.56
PtcraP0C6B2 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PtcraP0C6B2 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PtcraP0C6B2 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PtcraP0C6B2 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PtcraP0C6B2 Gm43566-201ENSMUST00000196851 808 ntBASIC18.54■□□□□ 0.56
PtcraP0C6B2 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PtcraP0C6B2 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
PtcraP0C6B2 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
PtcraP0C6B2 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC18.54■□□□□ 0.56
PtcraP0C6B2 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
PtcraP0C6B2 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PtcraP0C6B2 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
PtcraP0C6B2 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
PtcraP0C6B2 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PtcraP0C6B2 Gm42418-201ENSMUST00000182010 1831 ntBASIC18.52■□□□□ 0.56
PtcraP0C6B2 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PtcraP0C6B2 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
PtcraP0C6B2 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
PtcraP0C6B2 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
PtcraP0C6B2 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
PtcraP0C6B2 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
PtcraP0C6B2 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PtcraP0C6B2 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PtcraP0C6B2 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC18.51■□□□□ 0.55
PtcraP0C6B2 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PtcraP0C6B2 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PtcraP0C6B2 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC18.51■□□□□ 0.55
PtcraP0C6B2 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PtcraP0C6B2 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PtcraP0C6B2 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PtcraP0C6B2 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PtcraP0C6B2 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PtcraP0C6B2 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC18.5■□□□□ 0.55
PtcraP0C6B2 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PtcraP0C6B2 Gm26766-202ENSMUST00000227544 2347 ntBASIC18.5■□□□□ 0.55
PtcraP0C6B2 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PtcraP0C6B2 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PtcraP0C6B2 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PtcraP0C6B2 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC18.49■□□□□ 0.55
PtcraP0C6B2 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
PtcraP0C6B2 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC18.49■□□□□ 0.55
PtcraP0C6B2 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PtcraP0C6B2 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC18.49■□□□□ 0.55
PtcraP0C6B2 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PtcraP0C6B2 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PtcraP0C6B2 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC18.49■□□□□ 0.55
PtcraP0C6B2 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC18.49■□□□□ 0.55
PtcraP0C6B2 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PtcraP0C6B2 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
PtcraP0C6B2 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PtcraP0C6B2 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
PtcraP0C6B2 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PtcraP0C6B2 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PtcraP0C6B2 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PtcraP0C6B2 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PtcraP0C6B2 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PtcraP0C6B2 Gm11847-201ENSMUST00000125165 1119 ntBASIC18.47■□□□□ 0.55
PtcraP0C6B2 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC18.47■□□□□ 0.55
PtcraP0C6B2 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PtcraP0C6B2 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC18.47■□□□□ 0.55
PtcraP0C6B2 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
PtcraP0C6B2 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
PtcraP0C6B2 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PtcraP0C6B2 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PtcraP0C6B2 Gm28536-201ENSMUST00000190971 1317 ntBASIC18.47■□□□□ 0.55
PtcraP0C6B2 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC18.47■□□□□ 0.55
PtcraP0C6B2 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
PtcraP0C6B2 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PtcraP0C6B2 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC18.46■□□□□ 0.55
PtcraP0C6B2 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC18.46■□□□□ 0.55
PtcraP0C6B2 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PtcraP0C6B2 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PtcraP0C6B2 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.54
PtcraP0C6B2 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
PtcraP0C6B2 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PtcraP0C6B2 Gm37415-201ENSMUST00000192265 2054 ntBASIC18.45■□□□□ 0.54
PtcraP0C6B2 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
PtcraP0C6B2 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
PtcraP0C6B2 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PtcraP0C6B2 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC18.45■□□□□ 0.54
PtcraP0C6B2 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PtcraP0C6B2 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PtcraP0C6B2 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
PtcraP0C6B2 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PtcraP0C6B2 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PtcraP0C6B2 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
PtcraP0C6B2 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PtcraP0C6B2 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PtcraP0C6B2 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PtcraP0C6B2 Gm16464-201ENSMUST00000117815 1095 ntBASIC18.43■□□□□ 0.54
PtcraP0C6B2 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms