Protein–RNA interactions for Protein: P06336

Ig epsilon chain C region, mousemouse

Predictions only

Length 421 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06336 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
P06336 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
P06336 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
P06336 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
P06336 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
P06336 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
P06336 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC19.68■□□□□ 0.74
P06336 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.68■□□□□ 0.74
P06336 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC19.68■□□□□ 0.74
P06336 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC19.67■□□□□ 0.74
P06336 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC19.67■□□□□ 0.74
P06336 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
P06336 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
P06336 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
P06336 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
P06336 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
P06336 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
P06336 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
P06336 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
P06336 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
P06336 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
P06336 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
P06336 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
P06336 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
P06336 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
P06336 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
P06336 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
P06336 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
P06336 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC19.65■□□□□ 0.74
P06336 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC19.65■□□□□ 0.74
P06336 Gm28536-201ENSMUST00000190971 1317 ntBASIC19.65■□□□□ 0.74
P06336 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
P06336 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
P06336 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC19.64■□□□□ 0.74
P06336 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.74
P06336 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
P06336 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
P06336 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
P06336 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
P06336 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
P06336 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
P06336 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
P06336 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
P06336 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
P06336 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
P06336 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC19.63■□□□□ 0.73
P06336 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC19.63■□□□□ 0.73
P06336 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC19.63■□□□□ 0.73
P06336 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
P06336 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
P06336 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
P06336 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
P06336 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
P06336 AC153962.1-201ENSMUST00000218530 1948 ntBASIC19.62■□□□□ 0.73
P06336 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
P06336 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
P06336 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
P06336 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
P06336 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
P06336 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
P06336 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
P06336 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC19.61■□□□□ 0.73
P06336 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
P06336 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC19.6■□□□□ 0.73
P06336 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
P06336 Gm11847-201ENSMUST00000125165 1119 ntBASIC19.6■□□□□ 0.73
P06336 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
P06336 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
P06336 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC19.6■□□□□ 0.73
P06336 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
P06336 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
P06336 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
P06336 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
P06336 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
P06336 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
P06336 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
P06336 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
P06336 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
P06336 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
P06336 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
P06336 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
P06336 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
P06336 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
P06336 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC19.58■□□□□ 0.72
P06336 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
P06336 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
P06336 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC19.57■□□□□ 0.72
P06336 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
P06336 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
P06336 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
P06336 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC19.57■□□□□ 0.72
P06336 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
P06336 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
P06336 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
P06336 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
P06336 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
P06336 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
P06336 Gm16464-201ENSMUST00000117815 1095 ntBASIC19.56■□□□□ 0.72
P06336 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
P06336 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms