Protein–RNA interactions for Protein: O88413

Tulp3, Tubby-related protein 3, mousemouse

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tulp3O88413 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Tulp3O88413 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.86■□□□□ 0.77
Tulp3O88413 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Tulp3O88413 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Tulp3O88413 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC19.86■□□□□ 0.77
Tulp3O88413 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Tulp3O88413 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Tulp3O88413 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Tulp3O88413 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Tulp3O88413 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Tulp3O88413 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC19.84■□□□□ 0.77
Tulp3O88413 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Tulp3O88413 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Tulp3O88413 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Tulp3O88413 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Tulp3O88413 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Tulp3O88413 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Tulp3O88413 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Tulp3O88413 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.83■□□□□ 0.77
Tulp3O88413 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Tulp3O88413 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Tulp3O88413 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Tulp3O88413 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Tulp3O88413 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Tulp3O88413 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Tulp3O88413 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Tulp3O88413 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Tulp3O88413 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Tulp3O88413 Hsf1-207ENSMUST00000228371 2102 ntBASIC19.81■□□□□ 0.76
Tulp3O88413 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Tulp3O88413 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Tulp3O88413 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Tulp3O88413 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Tulp3O88413 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Tulp3O88413 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Tulp3O88413 AC167019.3-201ENSMUST00000228225 1266 ntBASIC19.8■□□□□ 0.76
Tulp3O88413 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Tulp3O88413 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Tulp3O88413 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC19.8■□□□□ 0.76
Tulp3O88413 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Tulp3O88413 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Tulp3O88413 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Tulp3O88413 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Tulp3O88413 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Tulp3O88413 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Tulp3O88413 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Tulp3O88413 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Tulp3O88413 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Tulp3O88413 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Tulp3O88413 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.79■□□□□ 0.76
Tulp3O88413 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Tulp3O88413 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Tulp3O88413 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Tulp3O88413 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Tulp3O88413 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Tulp3O88413 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Tulp3O88413 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Tulp3O88413 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Tulp3O88413 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Tulp3O88413 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Tulp3O88413 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Tulp3O88413 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Tulp3O88413 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Tulp3O88413 Gm44428-201ENSMUST00000204474 874 ntBASIC19.77■□□□□ 0.76
Tulp3O88413 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Tulp3O88413 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Tulp3O88413 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC19.76■□□□□ 0.75
Tulp3O88413 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Tulp3O88413 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC19.76■□□□□ 0.75
Tulp3O88413 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Tulp3O88413 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Tulp3O88413 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Tulp3O88413 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Tulp3O88413 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Tulp3O88413 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Tulp3O88413 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Tulp3O88413 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Tulp3O88413 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Tulp3O88413 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Tulp3O88413 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Tulp3O88413 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tulp3O88413 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.73■□□□□ 0.75
Tulp3O88413 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tulp3O88413 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tulp3O88413 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tulp3O88413 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Tulp3O88413 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tulp3O88413 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tulp3O88413 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tulp3O88413 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tulp3O88413 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tulp3O88413 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tulp3O88413 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Tulp3O88413 AC117769.4-201ENSMUST00000225679 685 ntBASIC19.72■□□□□ 0.75
Tulp3O88413 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tulp3O88413 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tulp3O88413 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tulp3O88413 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
Tulp3O88413 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tulp3O88413 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms