Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col5a1O88207 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col5a1O88207 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col5a1O88207 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Col5a1O88207 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Col5a1O88207 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Col5a1O88207 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Col5a1O88207 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Col5a1O88207 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC19.67■□□□□ 0.74
Col5a1O88207 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC19.67■□□□□ 0.74
Col5a1O88207 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Col5a1O88207 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Col5a1O88207 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Col5a1O88207 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Col5a1O88207 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Col5a1O88207 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Col5a1O88207 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Col5a1O88207 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Col5a1O88207 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Col5a1O88207 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Col5a1O88207 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC19.65■□□□□ 0.74
Col5a1O88207 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Col5a1O88207 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC19.64■□□□□ 0.74
Col5a1O88207 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Col5a1O88207 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Col5a1O88207 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Col5a1O88207 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Col5a1O88207 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC19.64■□□□□ 0.73
Col5a1O88207 Il17rd-202ENSMUST00000223942 2186 ntBASIC19.64■□□□□ 0.73
Col5a1O88207 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Col5a1O88207 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC19.63■□□□□ 0.73
Col5a1O88207 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Col5a1O88207 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC19.63■□□□□ 0.73
Col5a1O88207 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Col5a1O88207 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Col5a1O88207 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col5a1O88207 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col5a1O88207 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col5a1O88207 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Col5a1O88207 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC19.62■□□□□ 0.73
Col5a1O88207 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC19.62■□□□□ 0.73
Col5a1O88207 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Col5a1O88207 Gm6934-201ENSMUST00000194780 1905 ntBASIC19.62■□□□□ 0.73
Col5a1O88207 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC19.61■□□□□ 0.73
Col5a1O88207 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Col5a1O88207 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Col5a1O88207 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Col5a1O88207 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC19.6■□□□□ 0.73
Col5a1O88207 Gm8093-201ENSMUST00000128935 1892 ntBASIC19.6■□□□□ 0.73
Col5a1O88207 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Col5a1O88207 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC19.6■□□□□ 0.73
Col5a1O88207 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Col5a1O88207 Golgb1-201ENSMUST00000023534 498 ntBASIC19.6■□□□□ 0.73
Col5a1O88207 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Col5a1O88207 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Col5a1O88207 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Col5a1O88207 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Col5a1O88207 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Col5a1O88207 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Col5a1O88207 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
Col5a1O88207 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
Col5a1O88207 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Col5a1O88207 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Col5a1O88207 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Col5a1O88207 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Col5a1O88207 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Col5a1O88207 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Col5a1O88207 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Col5a1O88207 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Col5a1O88207 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Col5a1O88207 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Col5a1O88207 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Col5a1O88207 Gm2011-201ENSMUST00000203124 1263 ntBASIC19.58■□□□□ 0.72
Col5a1O88207 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Col5a1O88207 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Col5a1O88207 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Col5a1O88207 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Col5a1O88207 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Col5a1O88207 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Col5a1O88207 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Col5a1O88207 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Col5a1O88207 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Col5a1O88207 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Col5a1O88207 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Col5a1O88207 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Col5a1O88207 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Col5a1O88207 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC19.55■□□□□ 0.72
Col5a1O88207 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Col5a1O88207 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
Col5a1O88207 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC19.54■□□□□ 0.72
Col5a1O88207 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Col5a1O88207 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Col5a1O88207 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC19.53■□□□□ 0.72
Col5a1O88207 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Col5a1O88207 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC19.53■□□□□ 0.72
Col5a1O88207 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Col5a1O88207 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Col5a1O88207 AC116713.1-201ENSMUST00000215074 430 ntBASIC19.53■□□□□ 0.72
Col5a1O88207 Spcs1-207ENSMUST00000228767 1008 ntBASIC19.53■□□□□ 0.72
Col5a1O88207 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC19.53■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms