Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC18.79■□□□□ 0.6
Trav13d-3J3QMG8 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Trav13d-3J3QMG8 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trav13d-3J3QMG8 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trav13d-3J3QMG8 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Trav13d-3J3QMG8 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trav13d-3J3QMG8 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trav13d-3J3QMG8 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC18.78■□□□□ 0.6
Trav13d-3J3QMG8 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trav13d-3J3QMG8 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC18.78■□□□□ 0.6
Trav13d-3J3QMG8 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trav13d-3J3QMG8 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Trav13d-3J3QMG8 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Trav13d-3J3QMG8 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trav13d-3J3QMG8 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Trav13d-3J3QMG8 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trav13d-3J3QMG8 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Trav13d-3J3QMG8 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trav13d-3J3QMG8 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Trav13d-3J3QMG8 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Trav13d-3J3QMG8 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC18.77■□□□□ 0.59
Trav13d-3J3QMG8 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Trav13d-3J3QMG8 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Trav13d-3J3QMG8 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trav13d-3J3QMG8 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
Trav13d-3J3QMG8 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC18.76■□□□□ 0.59
Trav13d-3J3QMG8 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trav13d-3J3QMG8 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trav13d-3J3QMG8 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trav13d-3J3QMG8 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Trav13d-3J3QMG8 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trav13d-3J3QMG8 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trav13d-3J3QMG8 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trav13d-3J3QMG8 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC18.75■□□□□ 0.59
Trav13d-3J3QMG8 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Trav13d-3J3QMG8 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trav13d-3J3QMG8 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trav13d-3J3QMG8 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trav13d-3J3QMG8 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trav13d-3J3QMG8 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trav13d-3J3QMG8 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trav13d-3J3QMG8 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trav13d-3J3QMG8 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trav13d-3J3QMG8 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC18.74■□□□□ 0.59
Trav13d-3J3QMG8 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC18.74■□□□□ 0.59
Trav13d-3J3QMG8 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trav13d-3J3QMG8 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trav13d-3J3QMG8 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Trav13d-3J3QMG8 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trav13d-3J3QMG8 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trav13d-3J3QMG8 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Trav13d-3J3QMG8 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trav13d-3J3QMG8 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trav13d-3J3QMG8 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trav13d-3J3QMG8 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trav13d-3J3QMG8 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trav13d-3J3QMG8 Gm42418-201ENSMUST00000182010 1831 ntBASIC18.73■□□□□ 0.59
Trav13d-3J3QMG8 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC18.73■□□□□ 0.59
Trav13d-3J3QMG8 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC18.73■□□□□ 0.59
Trav13d-3J3QMG8 Gm37415-201ENSMUST00000192265 2054 ntBASIC18.73■□□□□ 0.59
Trav13d-3J3QMG8 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trav13d-3J3QMG8 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trav13d-3J3QMG8 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trav13d-3J3QMG8 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trav13d-3J3QMG8 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trav13d-3J3QMG8 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trav13d-3J3QMG8 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC18.72■□□□□ 0.59
Trav13d-3J3QMG8 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trav13d-3J3QMG8 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Trav13d-3J3QMG8 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trav13d-3J3QMG8 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trav13d-3J3QMG8 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trav13d-3J3QMG8 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trav13d-3J3QMG8 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trav13d-3J3QMG8 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Trav13d-3J3QMG8 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Trav13d-3J3QMG8 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trav13d-3J3QMG8 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trav13d-3J3QMG8 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Trav13d-3J3QMG8 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trav13d-3J3QMG8 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Trav13d-3J3QMG8 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Trav13d-3J3QMG8 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trav13d-3J3QMG8 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trav13d-3J3QMG8 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC18.7■□□□□ 0.58
Trav13d-3J3QMG8 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC18.7■□□□□ 0.58
Trav13d-3J3QMG8 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trav13d-3J3QMG8 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Trav13d-3J3QMG8 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trav13d-3J3QMG8 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trav13d-3J3QMG8 Gm32051-202ENSMUST00000197905 2385 ntBASIC18.7■□□□□ 0.58
Trav13d-3J3QMG8 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Trav13d-3J3QMG8 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC18.7■□□□□ 0.58
Trav13d-3J3QMG8 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Trav13d-3J3QMG8 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trav13d-3J3QMG8 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Trav13d-3J3QMG8 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC18.69■□□□□ 0.58
Trav13d-3J3QMG8 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Trav13d-3J3QMG8 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trav13d-3J3QMG8 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC18.69■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms