Protein–RNA interactions for Protein: A0A140T8V5

Pcna-ps2, Proliferating cell nuclear antigen, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcna-ps2A0A140T8V5 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC21.3■■□□□ 1
Pcna-ps2A0A140T8V5 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC21.3■■□□□ 1
Pcna-ps2A0A140T8V5 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pcna-ps2A0A140T8V5 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Pcna-ps2A0A140T8V5 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC21.29■■□□□ 1
Pcna-ps2A0A140T8V5 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pcna-ps2A0A140T8V5 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC21.29■■□□□ 1
Pcna-ps2A0A140T8V5 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC21.29■■□□□ 1
Pcna-ps2A0A140T8V5 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pcna-ps2A0A140T8V5 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pcna-ps2A0A140T8V5 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pcna-ps2A0A140T8V5 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Pcna-ps2A0A140T8V5 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Pcna-ps2A0A140T8V5 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
Pcna-ps2A0A140T8V5 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pcna-ps2A0A140T8V5 Gm5067-201ENSMUST00000170449 1009 ntBASIC21.28■■□□□ 1
Pcna-ps2A0A140T8V5 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Pcna-ps2A0A140T8V5 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pcna-ps2A0A140T8V5 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pcna-ps2A0A140T8V5 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Pcna-ps2A0A140T8V5 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Pcna-ps2A0A140T8V5 AC117245.4-201ENSMUST00000217388 1646 ntBASIC21.27■■□□□ 1
Pcna-ps2A0A140T8V5 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Pcna-ps2A0A140T8V5 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC21.27■■□□□ 1
Pcna-ps2A0A140T8V5 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Pcna-ps2A0A140T8V5 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcna-ps2A0A140T8V5 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcna-ps2A0A140T8V5 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcna-ps2A0A140T8V5 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcna-ps2A0A140T8V5 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Pcna-ps2A0A140T8V5 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Pcna-ps2A0A140T8V5 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Pcna-ps2A0A140T8V5 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Pcna-ps2A0A140T8V5 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC21.25■□□□□ 0.99
Pcna-ps2A0A140T8V5 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pcna-ps2A0A140T8V5 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pcna-ps2A0A140T8V5 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Pcna-ps2A0A140T8V5 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pcna-ps2A0A140T8V5 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pcna-ps2A0A140T8V5 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pcna-ps2A0A140T8V5 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC21.25■□□□□ 0.99
Pcna-ps2A0A140T8V5 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pcna-ps2A0A140T8V5 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Pcna-ps2A0A140T8V5 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pcna-ps2A0A140T8V5 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Pcna-ps2A0A140T8V5 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Pcna-ps2A0A140T8V5 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pcna-ps2A0A140T8V5 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Pcna-ps2A0A140T8V5 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC21.24■□□□□ 0.99
Pcna-ps2A0A140T8V5 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC21.24■□□□□ 0.99
Pcna-ps2A0A140T8V5 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pcna-ps2A0A140T8V5 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC21.23■□□□□ 0.99
Pcna-ps2A0A140T8V5 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcna-ps2A0A140T8V5 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC21.23■□□□□ 0.99
Pcna-ps2A0A140T8V5 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC21.22■□□□□ 0.99
Pcna-ps2A0A140T8V5 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC21.22■□□□□ 0.99
Pcna-ps2A0A140T8V5 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Pcna-ps2A0A140T8V5 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Pcna-ps2A0A140T8V5 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC21.22■□□□□ 0.99
Pcna-ps2A0A140T8V5 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcna-ps2A0A140T8V5 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcna-ps2A0A140T8V5 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcna-ps2A0A140T8V5 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcna-ps2A0A140T8V5 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Pcna-ps2A0A140T8V5 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pcna-ps2A0A140T8V5 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pcna-ps2A0A140T8V5 AC124392.1-201ENSMUST00000225172 5324 ntBASIC21.21■□□□□ 0.99
Pcna-ps2A0A140T8V5 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pcna-ps2A0A140T8V5 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC21.21■□□□□ 0.99
Pcna-ps2A0A140T8V5 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pcna-ps2A0A140T8V5 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pcna-ps2A0A140T8V5 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Pcna-ps2A0A140T8V5 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pcna-ps2A0A140T8V5 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pcna-ps2A0A140T8V5 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pcna-ps2A0A140T8V5 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pcna-ps2A0A140T8V5 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcna-ps2A0A140T8V5 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcna-ps2A0A140T8V5 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Pcna-ps2A0A140T8V5 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Pcna-ps2A0A140T8V5 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Pcna-ps2A0A140T8V5 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Pcna-ps2A0A140T8V5 Gm43592-201ENSMUST00000196922 1165 ntBASIC21.18■□□□□ 0.98
Pcna-ps2A0A140T8V5 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcna-ps2A0A140T8V5 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC21.18■□□□□ 0.98
Pcna-ps2A0A140T8V5 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcna-ps2A0A140T8V5 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcna-ps2A0A140T8V5 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcna-ps2A0A140T8V5 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Pcna-ps2A0A140T8V5 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcna-ps2A0A140T8V5 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Pcna-ps2A0A140T8V5 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Pcna-ps2A0A140T8V5 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC21.17■□□□□ 0.98
Pcna-ps2A0A140T8V5 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Pcna-ps2A0A140T8V5 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Pcna-ps2A0A140T8V5 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcna-ps2A0A140T8V5 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcna-ps2A0A140T8V5 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Pcna-ps2A0A140T8V5 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC21.17■□□□□ 0.98
Pcna-ps2A0A140T8V5 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 67 ms