Protein–RNA interactions for Protein: A0A140T8Q0

Igkv3-3, Immunoglobulin kappa variable 3-3 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv3-3A0A140T8Q0 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Igkv3-3A0A140T8Q0 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Igkv3-3A0A140T8Q0 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Igkv3-3A0A140T8Q0 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Igkv3-3A0A140T8Q0 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Igkv3-3A0A140T8Q0 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Igkv3-3A0A140T8Q0 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Igkv3-3A0A140T8Q0 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Igkv3-3A0A140T8Q0 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Igkv3-3A0A140T8Q0 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Igkv3-3A0A140T8Q0 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Igkv3-3A0A140T8Q0 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Igkv3-3A0A140T8Q0 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Igkv3-3A0A140T8Q0 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Igkv3-3A0A140T8Q0 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Igkv3-3A0A140T8Q0 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC12.87□□□□□ -0.35
Igkv3-3A0A140T8Q0 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Igkv3-3A0A140T8Q0 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Igkv3-3A0A140T8Q0 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Igkv3-3A0A140T8Q0 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Igkv3-3A0A140T8Q0 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Igkv3-3A0A140T8Q0 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Igkv3-3A0A140T8Q0 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Igkv3-3A0A140T8Q0 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Igkv3-3A0A140T8Q0 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Igkv3-3A0A140T8Q0 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Igkv3-3A0A140T8Q0 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Igkv3-3A0A140T8Q0 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Igkv3-3A0A140T8Q0 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Igkv3-3A0A140T8Q0 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Igkv3-3A0A140T8Q0 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Igkv3-3A0A140T8Q0 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Igkv3-3A0A140T8Q0 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Igkv3-3A0A140T8Q0 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Igkv3-3A0A140T8Q0 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Igkv3-3A0A140T8Q0 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Igkv3-3A0A140T8Q0 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Igkv3-3A0A140T8Q0 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Igkv3-3A0A140T8Q0 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Igkv3-3A0A140T8Q0 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Igkv3-3A0A140T8Q0 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Igkv3-3A0A140T8Q0 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Igkv3-3A0A140T8Q0 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Igkv3-3A0A140T8Q0 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Igkv3-3A0A140T8Q0 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Igkv3-3A0A140T8Q0 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Igkv3-3A0A140T8Q0 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Igkv3-3A0A140T8Q0 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC12.84□□□□□ -0.35
Igkv3-3A0A140T8Q0 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Igkv3-3A0A140T8Q0 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Igkv3-3A0A140T8Q0 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Igkv3-3A0A140T8Q0 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Igkv3-3A0A140T8Q0 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Igkv3-3A0A140T8Q0 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Igkv3-3A0A140T8Q0 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Igkv3-3A0A140T8Q0 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Igkv3-3A0A140T8Q0 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Igkv3-3A0A140T8Q0 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Igkv3-3A0A140T8Q0 Dmtn-209ENSMUST00000228295 2572 ntBASIC12.83□□□□□ -0.35
Igkv3-3A0A140T8Q0 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.35
Igkv3-3A0A140T8Q0 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC12.83□□□□□ -0.36
Igkv3-3A0A140T8Q0 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Igkv3-3A0A140T8Q0 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Igkv3-3A0A140T8Q0 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Igkv3-3A0A140T8Q0 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Igkv3-3A0A140T8Q0 Gm26766-202ENSMUST00000227544 2347 ntBASIC12.83□□□□□ -0.36
Igkv3-3A0A140T8Q0 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Igkv3-3A0A140T8Q0 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Igkv3-3A0A140T8Q0 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Igkv3-3A0A140T8Q0 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Igkv3-3A0A140T8Q0 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Igkv3-3A0A140T8Q0 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Igkv3-3A0A140T8Q0 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Igkv3-3A0A140T8Q0 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC12.82□□□□□ -0.36
Igkv3-3A0A140T8Q0 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Igkv3-3A0A140T8Q0 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC12.82□□□□□ -0.36
Igkv3-3A0A140T8Q0 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Igkv3-3A0A140T8Q0 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Igkv3-3A0A140T8Q0 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Igkv3-3A0A140T8Q0 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Igkv3-3A0A140T8Q0 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Igkv3-3A0A140T8Q0 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Igkv3-3A0A140T8Q0 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Igkv3-3A0A140T8Q0 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Igkv3-3A0A140T8Q0 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Igkv3-3A0A140T8Q0 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Igkv3-3A0A140T8Q0 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Igkv3-3A0A140T8Q0 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Igkv3-3A0A140T8Q0 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Igkv3-3A0A140T8Q0 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Igkv3-3A0A140T8Q0 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Igkv3-3A0A140T8Q0 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Igkv3-3A0A140T8Q0 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Igkv3-3A0A140T8Q0 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Igkv3-3A0A140T8Q0 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Igkv3-3A0A140T8Q0 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Igkv3-3A0A140T8Q0 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC12.79□□□□□ -0.36
Igkv3-3A0A140T8Q0 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Igkv3-3A0A140T8Q0 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Igkv3-3A0A140T8Q0 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 12.3 ms