Protein–RNA interactions for Protein: A0A0B4J1H3

Trbv16, T cell receptor beta, variable 16 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv16A0A0B4J1H3 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Trbv16A0A0B4J1H3 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trbv16A0A0B4J1H3 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trbv16A0A0B4J1H3 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
Trbv16A0A0B4J1H3 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trbv16A0A0B4J1H3 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC15.43■□□□□ 0.06
Trbv16A0A0B4J1H3 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trbv16A0A0B4J1H3 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trbv16A0A0B4J1H3 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trbv16A0A0B4J1H3 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Trbv16A0A0B4J1H3 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trbv16A0A0B4J1H3 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC15.43■□□□□ 0.06
Trbv16A0A0B4J1H3 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC15.43■□□□□ 0.06
Trbv16A0A0B4J1H3 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv16A0A0B4J1H3 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv16A0A0B4J1H3 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC15.42■□□□□ 0.06
Trbv16A0A0B4J1H3 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv16A0A0B4J1H3 Gm6311-201ENSMUST00000073790 878 ntBASIC15.42■□□□□ 0.06
Trbv16A0A0B4J1H3 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv16A0A0B4J1H3 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
Trbv16A0A0B4J1H3 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trbv16A0A0B4J1H3 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trbv16A0A0B4J1H3 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trbv16A0A0B4J1H3 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trbv16A0A0B4J1H3 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trbv16A0A0B4J1H3 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC15.41■□□□□ 0.06
Trbv16A0A0B4J1H3 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC15.41■□□□□ 0.06
Trbv16A0A0B4J1H3 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trbv16A0A0B4J1H3 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trbv16A0A0B4J1H3 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trbv16A0A0B4J1H3 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trbv16A0A0B4J1H3 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Trbv16A0A0B4J1H3 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trbv16A0A0B4J1H3 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trbv16A0A0B4J1H3 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trbv16A0A0B4J1H3 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC15.4■□□□□ 0.06
Trbv16A0A0B4J1H3 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trbv16A0A0B4J1H3 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Trbv16A0A0B4J1H3 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trbv16A0A0B4J1H3 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trbv16A0A0B4J1H3 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Trbv16A0A0B4J1H3 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trbv16A0A0B4J1H3 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Trbv16A0A0B4J1H3 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC15.39■□□□□ 0.05
Trbv16A0A0B4J1H3 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trbv16A0A0B4J1H3 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Trbv16A0A0B4J1H3 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trbv16A0A0B4J1H3 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trbv16A0A0B4J1H3 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Trbv16A0A0B4J1H3 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trbv16A0A0B4J1H3 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Trbv16A0A0B4J1H3 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Trbv16A0A0B4J1H3 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trbv16A0A0B4J1H3 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trbv16A0A0B4J1H3 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trbv16A0A0B4J1H3 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trbv16A0A0B4J1H3 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trbv16A0A0B4J1H3 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC15.38■□□□□ 0.05
Trbv16A0A0B4J1H3 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trbv16A0A0B4J1H3 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trbv16A0A0B4J1H3 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trbv16A0A0B4J1H3 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trbv16A0A0B4J1H3 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trbv16A0A0B4J1H3 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Trbv16A0A0B4J1H3 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Trbv16A0A0B4J1H3 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trbv16A0A0B4J1H3 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trbv16A0A0B4J1H3 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC15.37■□□□□ 0.05
Trbv16A0A0B4J1H3 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
Trbv16A0A0B4J1H3 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trbv16A0A0B4J1H3 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trbv16A0A0B4J1H3 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trbv16A0A0B4J1H3 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trbv16A0A0B4J1H3 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trbv16A0A0B4J1H3 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trbv16A0A0B4J1H3 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trbv16A0A0B4J1H3 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Trbv16A0A0B4J1H3 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trbv16A0A0B4J1H3 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Trbv16A0A0B4J1H3 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trbv16A0A0B4J1H3 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trbv16A0A0B4J1H3 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trbv16A0A0B4J1H3 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trbv16A0A0B4J1H3 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trbv16A0A0B4J1H3 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trbv16A0A0B4J1H3 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trbv16A0A0B4J1H3 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trbv16A0A0B4J1H3 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trbv16A0A0B4J1H3 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trbv16A0A0B4J1H3 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trbv16A0A0B4J1H3 Gm43403-201ENSMUST00000198011 1786 ntBASIC15.34■□□□□ 0.05
Trbv16A0A0B4J1H3 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trbv16A0A0B4J1H3 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trbv16A0A0B4J1H3 Gm9806-201ENSMUST00000051080 552 ntBASIC15.34■□□□□ 0.05
Trbv16A0A0B4J1H3 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trbv16A0A0B4J1H3 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trbv16A0A0B4J1H3 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trbv16A0A0B4J1H3 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trbv16A0A0B4J1H3 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trbv16A0A0B4J1H3 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms