Protein–RNA interactions for Protein: A0A075B6B9

Trav6d-5, T cell receptor alpha variable 6D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-5A0A075B6B9 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Trav6d-5A0A075B6B9 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav6d-5A0A075B6B9 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Trav6d-5A0A075B6B9 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
Trav6d-5A0A075B6B9 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Trav6d-5A0A075B6B9 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trav6d-5A0A075B6B9 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC17.22■□□□□ 0.35
Trav6d-5A0A075B6B9 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav6d-5A0A075B6B9 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav6d-5A0A075B6B9 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav6d-5A0A075B6B9 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav6d-5A0A075B6B9 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav6d-5A0A075B6B9 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trav6d-5A0A075B6B9 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav6d-5A0A075B6B9 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav6d-5A0A075B6B9 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav6d-5A0A075B6B9 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trav6d-5A0A075B6B9 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav6d-5A0A075B6B9 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav6d-5A0A075B6B9 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav6d-5A0A075B6B9 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav6d-5A0A075B6B9 Gm15043-201ENSMUST00000118843 1543 ntBASIC17.21■□□□□ 0.34
Trav6d-5A0A075B6B9 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
Trav6d-5A0A075B6B9 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Trav6d-5A0A075B6B9 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trav6d-5A0A075B6B9 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav6d-5A0A075B6B9 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Trav6d-5A0A075B6B9 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav6d-5A0A075B6B9 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav6d-5A0A075B6B9 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC17.2■□□□□ 0.34
Trav6d-5A0A075B6B9 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav6d-5A0A075B6B9 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav6d-5A0A075B6B9 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trav6d-5A0A075B6B9 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav6d-5A0A075B6B9 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trav6d-5A0A075B6B9 Gm45364-201ENSMUST00000210883 159 ntBASIC17.19■□□□□ 0.34
Trav6d-5A0A075B6B9 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav6d-5A0A075B6B9 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trav6d-5A0A075B6B9 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Trav6d-5A0A075B6B9 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav6d-5A0A075B6B9 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trav6d-5A0A075B6B9 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trav6d-5A0A075B6B9 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav6d-5A0A075B6B9 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Trav6d-5A0A075B6B9 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav6d-5A0A075B6B9 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trav6d-5A0A075B6B9 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav6d-5A0A075B6B9 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Trav6d-5A0A075B6B9 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trav6d-5A0A075B6B9 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav6d-5A0A075B6B9 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Trav6d-5A0A075B6B9 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trav6d-5A0A075B6B9 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav6d-5A0A075B6B9 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav6d-5A0A075B6B9 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Trav6d-5A0A075B6B9 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trav6d-5A0A075B6B9 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav6d-5A0A075B6B9 Gm9939-201ENSMUST00000067161 1154 ntBASIC17.17■□□□□ 0.34
Trav6d-5A0A075B6B9 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trav6d-5A0A075B6B9 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav6d-5A0A075B6B9 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC17.16■□□□□ 0.34
Trav6d-5A0A075B6B9 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav6d-5A0A075B6B9 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav6d-5A0A075B6B9 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav6d-5A0A075B6B9 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Trav6d-5A0A075B6B9 Gm6821-201ENSMUST00000107540 542 ntBASIC17.16■□□□□ 0.34
Trav6d-5A0A075B6B9 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Trav6d-5A0A075B6B9 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav6d-5A0A075B6B9 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
Trav6d-5A0A075B6B9 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC17.16■□□□□ 0.34
Trav6d-5A0A075B6B9 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trav6d-5A0A075B6B9 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC17.16■□□□□ 0.34
Trav6d-5A0A075B6B9 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav6d-5A0A075B6B9 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav6d-5A0A075B6B9 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trav6d-5A0A075B6B9 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trav6d-5A0A075B6B9 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav6d-5A0A075B6B9 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav6d-5A0A075B6B9 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav6d-5A0A075B6B9 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav6d-5A0A075B6B9 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Trav6d-5A0A075B6B9 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Trav6d-5A0A075B6B9 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC17.14■□□□□ 0.33
Trav6d-5A0A075B6B9 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC17.14■□□□□ 0.33
Trav6d-5A0A075B6B9 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav6d-5A0A075B6B9 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav6d-5A0A075B6B9 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav6d-5A0A075B6B9 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav6d-5A0A075B6B9 Gm4430-201ENSMUST00000192413 1943 ntBASIC17.13■□□□□ 0.33
Trav6d-5A0A075B6B9 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav6d-5A0A075B6B9 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav6d-5A0A075B6B9 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav6d-5A0A075B6B9 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav6d-5A0A075B6B9 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav6d-5A0A075B6B9 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC17.12■□□□□ 0.33
Trav6d-5A0A075B6B9 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trav6d-5A0A075B6B9 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav6d-5A0A075B6B9 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav6d-5A0A075B6B9 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Trav6d-5A0A075B6B9 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms