Protein–RNA interactions for Protein: A0A075B603

Trav6-6, T cell receptor alpha variable 6-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-6A0A075B603 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trav6-6A0A075B603 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav6-6A0A075B603 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav6-6A0A075B603 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav6-6A0A075B603 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav6-6A0A075B603 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC15.79■□□□□ 0.12
Trav6-6A0A075B603 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav6-6A0A075B603 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav6-6A0A075B603 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Trav6-6A0A075B603 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav6-6A0A075B603 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trav6-6A0A075B603 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC15.78■□□□□ 0.12
Trav6-6A0A075B603 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Trav6-6A0A075B603 Terc-201ENSMUST00000082862 423 ntBASIC15.78■□□□□ 0.12
Trav6-6A0A075B603 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Trav6-6A0A075B603 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav6-6A0A075B603 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Trav6-6A0A075B603 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav6-6A0A075B603 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav6-6A0A075B603 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav6-6A0A075B603 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
Trav6-6A0A075B603 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav6-6A0A075B603 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav6-6A0A075B603 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav6-6A0A075B603 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC15.77■□□□□ 0.11
Trav6-6A0A075B603 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC15.76■□□□□ 0.11
Trav6-6A0A075B603 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav6-6A0A075B603 Gm34220-201ENSMUST00000223001 2709 ntBASIC15.76■□□□□ 0.11
Trav6-6A0A075B603 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav6-6A0A075B603 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Trav6-6A0A075B603 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav6-6A0A075B603 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav6-6A0A075B603 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav6-6A0A075B603 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trav6-6A0A075B603 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav6-6A0A075B603 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav6-6A0A075B603 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC15.75■□□□□ 0.11
Trav6-6A0A075B603 Gm45364-201ENSMUST00000210883 159 ntBASIC15.75■□□□□ 0.11
Trav6-6A0A075B603 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC15.75■□□□□ 0.11
Trav6-6A0A075B603 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav6-6A0A075B603 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC15.75■□□□□ 0.11
Trav6-6A0A075B603 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Trav6-6A0A075B603 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav6-6A0A075B603 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav6-6A0A075B603 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Trav6-6A0A075B603 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trav6-6A0A075B603 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav6-6A0A075B603 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trav6-6A0A075B603 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav6-6A0A075B603 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trav6-6A0A075B603 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Trav6-6A0A075B603 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav6-6A0A075B603 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav6-6A0A075B603 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav6-6A0A075B603 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav6-6A0A075B603 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav6-6A0A075B603 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trav6-6A0A075B603 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC15.74■□□□□ 0.11
Trav6-6A0A075B603 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Trav6-6A0A075B603 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav6-6A0A075B603 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
Trav6-6A0A075B603 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav6-6A0A075B603 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Trav6-6A0A075B603 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav6-6A0A075B603 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav6-6A0A075B603 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav6-6A0A075B603 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trav6-6A0A075B603 AC167019.3-201ENSMUST00000228225 1266 ntBASIC15.73■□□□□ 0.11
Trav6-6A0A075B603 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Trav6-6A0A075B603 Gm8093-201ENSMUST00000128935 1892 ntBASIC15.73■□□□□ 0.11
Trav6-6A0A075B603 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC15.73■□□□□ 0.11
Trav6-6A0A075B603 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav6-6A0A075B603 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav6-6A0A075B603 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC15.73■□□□□ 0.11
Trav6-6A0A075B603 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav6-6A0A075B603 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav6-6A0A075B603 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC15.72■□□□□ 0.11
Trav6-6A0A075B603 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav6-6A0A075B603 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav6-6A0A075B603 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav6-6A0A075B603 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trav6-6A0A075B603 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav6-6A0A075B603 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav6-6A0A075B603 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
Trav6-6A0A075B603 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav6-6A0A075B603 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Trav6-6A0A075B603 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav6-6A0A075B603 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC15.71■□□□□ 0.11
Trav6-6A0A075B603 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trav6-6A0A075B603 Pkd1-207ENSMUST00000228550 1050 ntBASIC15.71■□□□□ 0.11
Trav6-6A0A075B603 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav6-6A0A075B603 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav6-6A0A075B603 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trav6-6A0A075B603 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav6-6A0A075B603 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav6-6A0A075B603 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trav6-6A0A075B603 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC15.7■□□□□ 0.1
Trav6-6A0A075B603 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trav6-6A0A075B603 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trav6-6A0A075B603 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms