Protein–RNA interactions for Protein: A0A075B601

Trav9-1, T cell receptor alpha variable 9-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-1A0A075B601 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trav9-1A0A075B601 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav9-1A0A075B601 Gm12504-201ENSMUST00000120860 2231 ntBASIC16.58■□□□□ 0.24
Trav9-1A0A075B601 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav9-1A0A075B601 Gm37415-201ENSMUST00000192265 2054 ntBASIC16.57■□□□□ 0.24
Trav9-1A0A075B601 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav9-1A0A075B601 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trav9-1A0A075B601 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav9-1A0A075B601 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC16.57■□□□□ 0.24
Trav9-1A0A075B601 Gm27502-201ENSMUST00000183495 199 ntBASIC16.57■□□□□ 0.24
Trav9-1A0A075B601 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav9-1A0A075B601 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav9-1A0A075B601 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav9-1A0A075B601 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav9-1A0A075B601 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Trav9-1A0A075B601 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav9-1A0A075B601 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Trav9-1A0A075B601 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trav9-1A0A075B601 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trav9-1A0A075B601 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav9-1A0A075B601 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav9-1A0A075B601 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav9-1A0A075B601 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav9-1A0A075B601 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav9-1A0A075B601 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav9-1A0A075B601 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav9-1A0A075B601 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Trav9-1A0A075B601 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav9-1A0A075B601 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC16.55■□□□□ 0.24
Trav9-1A0A075B601 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC16.55■□□□□ 0.24
Trav9-1A0A075B601 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Trav9-1A0A075B601 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trav9-1A0A075B601 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav9-1A0A075B601 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
Trav9-1A0A075B601 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trav9-1A0A075B601 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav9-1A0A075B601 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trav9-1A0A075B601 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Trav9-1A0A075B601 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trav9-1A0A075B601 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav9-1A0A075B601 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Trav9-1A0A075B601 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trav9-1A0A075B601 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Trav9-1A0A075B601 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav9-1A0A075B601 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav9-1A0A075B601 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
Trav9-1A0A075B601 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav9-1A0A075B601 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav9-1A0A075B601 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav9-1A0A075B601 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Trav9-1A0A075B601 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav9-1A0A075B601 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav9-1A0A075B601 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav9-1A0A075B601 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav9-1A0A075B601 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav9-1A0A075B601 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC16.53■□□□□ 0.24
Trav9-1A0A075B601 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav9-1A0A075B601 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav9-1A0A075B601 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
Trav9-1A0A075B601 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav9-1A0A075B601 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav9-1A0A075B601 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Trav9-1A0A075B601 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav9-1A0A075B601 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Trav9-1A0A075B601 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav9-1A0A075B601 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Trav9-1A0A075B601 Gm11175-201ENSMUST00000116172 543 ntBASIC16.52■□□□□ 0.24
Trav9-1A0A075B601 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC16.52■□□□□ 0.24
Trav9-1A0A075B601 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav9-1A0A075B601 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC16.52■□□□□ 0.24
Trav9-1A0A075B601 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trav9-1A0A075B601 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trav9-1A0A075B601 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trav9-1A0A075B601 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trav9-1A0A075B601 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trav9-1A0A075B601 Gm42418-201ENSMUST00000182010 1831 ntBASIC16.52■□□□□ 0.23
Trav9-1A0A075B601 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trav9-1A0A075B601 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav9-1A0A075B601 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav9-1A0A075B601 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav9-1A0A075B601 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trav9-1A0A075B601 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav9-1A0A075B601 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC16.51■□□□□ 0.23
Trav9-1A0A075B601 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Trav9-1A0A075B601 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trav9-1A0A075B601 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Trav9-1A0A075B601 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trav9-1A0A075B601 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav9-1A0A075B601 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC16.5■□□□□ 0.23
Trav9-1A0A075B601 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav9-1A0A075B601 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav9-1A0A075B601 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav9-1A0A075B601 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Trav9-1A0A075B601 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav9-1A0A075B601 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav9-1A0A075B601 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav9-1A0A075B601 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trav9-1A0A075B601 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav9-1A0A075B601 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav9-1A0A075B601 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms