Protein–RNA interactions for Protein: A0A075B5W3

Ighv1-53, Immunoglobulin heavy variable 1-53 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-53A0A075B5W3 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ighv1-53A0A075B5W3 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Ighv1-53A0A075B5W3 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ighv1-53A0A075B5W3 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ighv1-53A0A075B5W3 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ighv1-53A0A075B5W3 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Ighv1-53A0A075B5W3 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ighv1-53A0A075B5W3 Nsd1-206ENSMUST00000224918 1001 ntBASIC16.07■□□□□ 0.16
Ighv1-53A0A075B5W3 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ighv1-53A0A075B5W3 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Ighv1-53A0A075B5W3 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ighv1-53A0A075B5W3 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ighv1-53A0A075B5W3 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ighv1-53A0A075B5W3 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ighv1-53A0A075B5W3 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ighv1-53A0A075B5W3 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ighv1-53A0A075B5W3 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ighv1-53A0A075B5W3 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ighv1-53A0A075B5W3 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Ighv1-53A0A075B5W3 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ighv1-53A0A075B5W3 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC16.05■□□□□ 0.16
Ighv1-53A0A075B5W3 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ighv1-53A0A075B5W3 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ighv1-53A0A075B5W3 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ighv1-53A0A075B5W3 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ighv1-53A0A075B5W3 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ighv1-53A0A075B5W3 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ighv1-53A0A075B5W3 Gm14523-201ENSMUST00000117260 558 ntBASIC16.04■□□□□ 0.16
Ighv1-53A0A075B5W3 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ighv1-53A0A075B5W3 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Ighv1-53A0A075B5W3 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ighv1-53A0A075B5W3 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ighv1-53A0A075B5W3 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ighv1-53A0A075B5W3 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC16.03■□□□□ 0.16
Ighv1-53A0A075B5W3 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ighv1-53A0A075B5W3 Gm6277-202ENSMUST00000224036 2779 ntBASIC16.03■□□□□ 0.16
Ighv1-53A0A075B5W3 Gm5987-201ENSMUST00000196433 1151 ntBASIC16.03■□□□□ 0.16
Ighv1-53A0A075B5W3 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ighv1-53A0A075B5W3 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ighv1-53A0A075B5W3 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ighv1-53A0A075B5W3 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ighv1-53A0A075B5W3 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ighv1-53A0A075B5W3 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Ighv1-53A0A075B5W3 Gm12504-201ENSMUST00000120860 2231 ntBASIC16.02■□□□□ 0.16
Ighv1-53A0A075B5W3 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Ighv1-53A0A075B5W3 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ighv1-53A0A075B5W3 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ighv1-53A0A075B5W3 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC16.02■□□□□ 0.16
Ighv1-53A0A075B5W3 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC16.02■□□□□ 0.16
Ighv1-53A0A075B5W3 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ighv1-53A0A075B5W3 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ighv1-53A0A075B5W3 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ighv1-53A0A075B5W3 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ighv1-53A0A075B5W3 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ighv1-53A0A075B5W3 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ighv1-53A0A075B5W3 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ighv1-53A0A075B5W3 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ighv1-53A0A075B5W3 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC16.01■□□□□ 0.15
Ighv1-53A0A075B5W3 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ighv1-53A0A075B5W3 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Ighv1-53A0A075B5W3 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC16.01■□□□□ 0.15
Ighv1-53A0A075B5W3 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Ighv1-53A0A075B5W3 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Ighv1-53A0A075B5W3 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ighv1-53A0A075B5W3 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ighv1-53A0A075B5W3 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ighv1-53A0A075B5W3 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ighv1-53A0A075B5W3 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ighv1-53A0A075B5W3 Gm43006-201ENSMUST00000197702 1602 ntBASIC16.01■□□□□ 0.15
Ighv1-53A0A075B5W3 Gm43403-201ENSMUST00000198011 1786 ntBASIC16■□□□□ 0.15
Ighv1-53A0A075B5W3 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Ighv1-53A0A075B5W3 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ighv1-53A0A075B5W3 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Ighv1-53A0A075B5W3 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC16■□□□□ 0.15
Ighv1-53A0A075B5W3 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
Ighv1-53A0A075B5W3 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Ighv1-53A0A075B5W3 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Ighv1-53A0A075B5W3 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ighv1-53A0A075B5W3 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Ighv1-53A0A075B5W3 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC15.99■□□□□ 0.15
Ighv1-53A0A075B5W3 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ighv1-53A0A075B5W3 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ighv1-53A0A075B5W3 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ighv1-53A0A075B5W3 Gm11175-201ENSMUST00000116172 543 ntBASIC15.98■□□□□ 0.15
Ighv1-53A0A075B5W3 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC15.98■□□□□ 0.15
Ighv1-53A0A075B5W3 Gm27502-201ENSMUST00000183495 199 ntBASIC15.98■□□□□ 0.15
Ighv1-53A0A075B5W3 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ighv1-53A0A075B5W3 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ighv1-53A0A075B5W3 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ighv1-53A0A075B5W3 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Ighv1-53A0A075B5W3 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
Ighv1-53A0A075B5W3 Gm7332-201ENSMUST00000118351 454 ntBASIC15.97■□□□□ 0.15
Ighv1-53A0A075B5W3 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ighv1-53A0A075B5W3 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
Ighv1-53A0A075B5W3 Gm38160-201ENSMUST00000193090 2499 ntBASIC15.97■□□□□ 0.15
Ighv1-53A0A075B5W3 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ighv1-53A0A075B5W3 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ighv1-53A0A075B5W3 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC15.96■□□□□ 0.15
Ighv1-53A0A075B5W3 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ighv1-53A0A075B5W3 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms