Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC18■□□□□ 0.47
VTA1Q9NP79 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC18■□□□□ 0.47
VTA1Q9NP79 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC18■□□□□ 0.47
VTA1Q9NP79 ORC6-206ENST00000568364 888 ntTSL 5 BASIC18■□□□□ 0.47
VTA1Q9NP79 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC18■□□□□ 0.47
VTA1Q9NP79 Six3os1_5.1-201ENST00000611000 271 ntBASIC18■□□□□ 0.47
VTA1Q9NP79 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
VTA1Q9NP79 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC18■□□□□ 0.47
VTA1Q9NP79 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC18■□□□□ 0.47
VTA1Q9NP79 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
VTA1Q9NP79 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
VTA1Q9NP79 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
VTA1Q9NP79 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
VTA1Q9NP79 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
VTA1Q9NP79 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
VTA1Q9NP79 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC18■□□□□ 0.47
VTA1Q9NP79 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC18■□□□□ 0.47
VTA1Q9NP79 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC18■□□□□ 0.47
VTA1Q9NP79 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
VTA1Q9NP79 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC17.99■□□□□ 0.47
VTA1Q9NP79 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.99■□□□□ 0.47
VTA1Q9NP79 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
VTA1Q9NP79 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
VTA1Q9NP79 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
VTA1Q9NP79 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
VTA1Q9NP79 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
VTA1Q9NP79 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
VTA1Q9NP79 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
VTA1Q9NP79 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
VTA1Q9NP79 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
VTA1Q9NP79 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
VTA1Q9NP79 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
VTA1Q9NP79 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
VTA1Q9NP79 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
VTA1Q9NP79 PKIG-203ENST00000372887 769 ntTSL 3 BASIC17.99■□□□□ 0.47
VTA1Q9NP79 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC17.99■□□□□ 0.47
VTA1Q9NP79 HIST1H2BPS3-201ENST00000419683 341 ntBASIC17.99■□□□□ 0.47
VTA1Q9NP79 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC17.99■□□□□ 0.47
VTA1Q9NP79 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
VTA1Q9NP79 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC17.99■□□□□ 0.47
VTA1Q9NP79 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC17.99■□□□□ 0.47
VTA1Q9NP79 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC17.99■□□□□ 0.47
VTA1Q9NP79 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC17.99■□□□□ 0.47
VTA1Q9NP79 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC17.99■□□□□ 0.47
VTA1Q9NP79 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC17.99■□□□□ 0.47
VTA1Q9NP79 NAA38-206ENST00000576384 424 ntTSL 2 BASIC17.99■□□□□ 0.47
VTA1Q9NP79 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC17.99■□□□□ 0.47
VTA1Q9NP79 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC17.99■□□□□ 0.47
VTA1Q9NP79 AC010319.3-201ENST00000597028 470 ntBASIC17.99■□□□□ 0.47
VTA1Q9NP79 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC17.99■□□□□ 0.47
VTA1Q9NP79 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC17.99■□□□□ 0.47
VTA1Q9NP79 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.99■□□□□ 0.47
VTA1Q9NP79 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
VTA1Q9NP79 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC17.99■□□□□ 0.47
VTA1Q9NP79 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
VTA1Q9NP79 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
VTA1Q9NP79 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
VTA1Q9NP79 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
VTA1Q9NP79 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
VTA1Q9NP79 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
VTA1Q9NP79 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
VTA1Q9NP79 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
VTA1Q9NP79 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
VTA1Q9NP79 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC17.98■□□□□ 0.47
VTA1Q9NP79 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
VTA1Q9NP79 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
VTA1Q9NP79 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.98■□□□□ 0.47
VTA1Q9NP79 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.98■□□□□ 0.47
VTA1Q9NP79 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
VTA1Q9NP79 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
VTA1Q9NP79 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
VTA1Q9NP79 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC17.98■□□□□ 0.47
VTA1Q9NP79 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
VTA1Q9NP79 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC17.98■□□□□ 0.47
VTA1Q9NP79 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC17.98■□□□□ 0.47
VTA1Q9NP79 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC17.98■□□□□ 0.47
VTA1Q9NP79 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
VTA1Q9NP79 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
VTA1Q9NP79 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC17.98■□□□□ 0.47
VTA1Q9NP79 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
VTA1Q9NP79 PIGL-212ENST00000581006 554 ntTSL 4 BASIC17.98■□□□□ 0.47
VTA1Q9NP79 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC17.98■□□□□ 0.47
VTA1Q9NP79 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
VTA1Q9NP79 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
VTA1Q9NP79 AP001282.1-201ENST00000531301 1499 ntBASIC17.98■□□□□ 0.47
VTA1Q9NP79 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
VTA1Q9NP79 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
VTA1Q9NP79 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC17.98■□□□□ 0.47
VTA1Q9NP79 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
VTA1Q9NP79 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC17.98■□□□□ 0.47
VTA1Q9NP79 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
VTA1Q9NP79 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
VTA1Q9NP79 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.98■□□□□ 0.47
VTA1Q9NP79 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
VTA1Q9NP79 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
VTA1Q9NP79 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
VTA1Q9NP79 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
VTA1Q9NP79 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
VTA1Q9NP79 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC17.98■□□□□ 0.47
VTA1Q9NP79 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms