Protein–RNA interactions for Protein: Q9BQI6

SLF1, SMC5-SMC6 complex localization factor protein 1, humanhuman

Predictions only

Length 1,058 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLF1Q9BQI6 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
SLF1Q9BQI6 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC18.83■□□□□ 0.6
SLF1Q9BQI6 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
SLF1Q9BQI6 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SLF1Q9BQI6 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
SLF1Q9BQI6 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC18.83■□□□□ 0.6
SLF1Q9BQI6 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC18.83■□□□□ 0.6
SLF1Q9BQI6 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC18.83■□□□□ 0.6
SLF1Q9BQI6 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SLF1Q9BQI6 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SLF1Q9BQI6 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC18.83■□□□□ 0.6
SLF1Q9BQI6 CECR7-204ENST00000609932 568 ntTSL 2 BASIC18.83■□□□□ 0.6
SLF1Q9BQI6 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SLF1Q9BQI6 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
SLF1Q9BQI6 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SLF1Q9BQI6 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC18.83■□□□□ 0.6
SLF1Q9BQI6 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
SLF1Q9BQI6 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
SLF1Q9BQI6 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
SLF1Q9BQI6 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SLF1Q9BQI6 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC18.83■□□□□ 0.6
SLF1Q9BQI6 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.6
SLF1Q9BQI6 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SLF1Q9BQI6 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC18.82■□□□□ 0.6
SLF1Q9BQI6 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC18.82■□□□□ 0.6
SLF1Q9BQI6 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
SLF1Q9BQI6 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLF1Q9BQI6 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLF1Q9BQI6 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLF1Q9BQI6 AC063926.2-201ENST00000623766 1308 ntBASIC18.82■□□□□ 0.6
SLF1Q9BQI6 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SLF1Q9BQI6 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLF1Q9BQI6 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
SLF1Q9BQI6 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLF1Q9BQI6 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
SLF1Q9BQI6 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SLF1Q9BQI6 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC18.82■□□□□ 0.6
SLF1Q9BQI6 AL512361.1-201ENST00000554200 418 ntBASIC18.82■□□□□ 0.6
SLF1Q9BQI6 AC010336.2-201ENST00000564226 506 ntBASIC18.82■□□□□ 0.6
SLF1Q9BQI6 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC18.82■□□□□ 0.6
SLF1Q9BQI6 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC18.82■□□□□ 0.6
SLF1Q9BQI6 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLF1Q9BQI6 AC025048.6-201ENST00000634326 1161 ntBASIC18.82■□□□□ 0.6
SLF1Q9BQI6 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
SLF1Q9BQI6 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC18.82■□□□□ 0.6
SLF1Q9BQI6 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC18.82■□□□□ 0.6
SLF1Q9BQI6 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLF1Q9BQI6 AC005622.1-201ENST00000636801 1703 ntBASIC18.82■□□□□ 0.6
SLF1Q9BQI6 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
SLF1Q9BQI6 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLF1Q9BQI6 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLF1Q9BQI6 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
SLF1Q9BQI6 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC18.82■□□□□ 0.6
SLF1Q9BQI6 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC18.82■□□□□ 0.6
SLF1Q9BQI6 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC18.82■□□□□ 0.6
SLF1Q9BQI6 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SLF1Q9BQI6 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLF1Q9BQI6 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC18.82■□□□□ 0.6
SLF1Q9BQI6 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
SLF1Q9BQI6 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
SLF1Q9BQI6 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SLF1Q9BQI6 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SLF1Q9BQI6 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC18.81■□□□□ 0.6
SLF1Q9BQI6 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC18.81■□□□□ 0.6
SLF1Q9BQI6 AC078925.2-201ENST00000624013 1973 ntBASIC18.81■□□□□ 0.6
SLF1Q9BQI6 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC18.81■□□□□ 0.6
SLF1Q9BQI6 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC18.81■□□□□ 0.6
SLF1Q9BQI6 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SLF1Q9BQI6 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SLF1Q9BQI6 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
SLF1Q9BQI6 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SLF1Q9BQI6 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SLF1Q9BQI6 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
SLF1Q9BQI6 SPDYE17-201ENST00000412399 783 ntBASIC18.81■□□□□ 0.6
SLF1Q9BQI6 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SLF1Q9BQI6 SERBP1P3-201ENST00000459980 809 ntBASIC18.81■□□□□ 0.6
SLF1Q9BQI6 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC18.81■□□□□ 0.6
SLF1Q9BQI6 AC135586.1-201ENST00000539323 574 ntBASIC18.81■□□□□ 0.6
SLF1Q9BQI6 RNA5-8SN1-201ENST00000610460 153 ntBASIC18.81■□□□□ 0.6
SLF1Q9BQI6 RNA5-8SN5-202ENST00000612463 153 ntBASIC18.81■□□□□ 0.6
SLF1Q9BQI6 RNA5-8SN4-201ENST00000613359 153 ntBASIC18.81■□□□□ 0.6
SLF1Q9BQI6 RNA5-8SN5-201ENST00000619471 153 ntBASIC18.81■□□□□ 0.6
SLF1Q9BQI6 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SLF1Q9BQI6 BTBD7P1-201ENST00000447253 1453 ntBASIC18.81■□□□□ 0.6
SLF1Q9BQI6 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SLF1Q9BQI6 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC18.81■□□□□ 0.6
SLF1Q9BQI6 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SLF1Q9BQI6 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SLF1Q9BQI6 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC18.81■□□□□ 0.6
SLF1Q9BQI6 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC18.81■□□□□ 0.6
SLF1Q9BQI6 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
SLF1Q9BQI6 KRT8P12-202ENST00000472924 1397 ntBASIC18.81■□□□□ 0.6
SLF1Q9BQI6 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SLF1Q9BQI6 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
SLF1Q9BQI6 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
SLF1Q9BQI6 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
SLF1Q9BQI6 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SLF1Q9BQI6 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC18.8■□□□□ 0.6
SLF1Q9BQI6 IMPDH1P4-201ENST00000445028 1534 ntBASIC18.8■□□□□ 0.6
SLF1Q9BQI6 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms