Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Chmp7Q8R1T1 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Chmp7Q8R1T1 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Chmp7Q8R1T1 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chmp7Q8R1T1 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chmp7Q8R1T1 AC159649.2-201ENSMUST00000222984 3223 ntBASIC16.81■□□□□ 0.28
Chmp7Q8R1T1 Snord83b-201ENSMUST00000104546 94 ntBASIC16.81■□□□□ 0.28
Chmp7Q8R1T1 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Chmp7Q8R1T1 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
Chmp7Q8R1T1 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Chmp7Q8R1T1 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chmp7Q8R1T1 Gm4819-201ENSMUST00000182170 1009 ntBASIC16.81■□□□□ 0.28
Chmp7Q8R1T1 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chmp7Q8R1T1 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Chmp7Q8R1T1 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Chmp7Q8R1T1 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chmp7Q8R1T1 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chmp7Q8R1T1 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chmp7Q8R1T1 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chmp7Q8R1T1 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC16.81■□□□□ 0.28
Chmp7Q8R1T1 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Chmp7Q8R1T1 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chmp7Q8R1T1 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Chmp7Q8R1T1 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC16.81■□□□□ 0.28
Chmp7Q8R1T1 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chmp7Q8R1T1 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chmp7Q8R1T1 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chmp7Q8R1T1 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Chmp7Q8R1T1 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Chmp7Q8R1T1 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chmp7Q8R1T1 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chmp7Q8R1T1 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC16.81■□□□□ 0.28
Chmp7Q8R1T1 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chmp7Q8R1T1 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chmp7Q8R1T1 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Chmp7Q8R1T1 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC16.8■□□□□ 0.28
Chmp7Q8R1T1 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chmp7Q8R1T1 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chmp7Q8R1T1 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC16.8■□□□□ 0.28
Chmp7Q8R1T1 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chmp7Q8R1T1 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chmp7Q8R1T1 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC16.8■□□□□ 0.28
Chmp7Q8R1T1 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chmp7Q8R1T1 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Chmp7Q8R1T1 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chmp7Q8R1T1 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chmp7Q8R1T1 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chmp7Q8R1T1 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Chmp7Q8R1T1 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC16.8■□□□□ 0.28
Chmp7Q8R1T1 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC16.8■□□□□ 0.28
Chmp7Q8R1T1 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Chmp7Q8R1T1 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC16.8■□□□□ 0.28
Chmp7Q8R1T1 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Chmp7Q8R1T1 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Chmp7Q8R1T1 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chmp7Q8R1T1 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC16.8■□□□□ 0.28
Chmp7Q8R1T1 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chmp7Q8R1T1 Gm30285-201ENSMUST00000214614 422 ntBASIC16.8■□□□□ 0.28
Chmp7Q8R1T1 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC16.8■□□□□ 0.28
Chmp7Q8R1T1 AC132317.1-201ENSMUST00000227227 962 ntBASIC16.8■□□□□ 0.28
Chmp7Q8R1T1 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chmp7Q8R1T1 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chmp7Q8R1T1 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chmp7Q8R1T1 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chmp7Q8R1T1 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chmp7Q8R1T1 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chmp7Q8R1T1 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chmp7Q8R1T1 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chmp7Q8R1T1 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chmp7Q8R1T1 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chmp7Q8R1T1 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chmp7Q8R1T1 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC16.8■□□□□ 0.28
Chmp7Q8R1T1 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Chmp7Q8R1T1 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chmp7Q8R1T1 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chmp7Q8R1T1 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC16.79■□□□□ 0.28
Chmp7Q8R1T1 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Chmp7Q8R1T1 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chmp7Q8R1T1 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chmp7Q8R1T1 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chmp7Q8R1T1 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chmp7Q8R1T1 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chmp7Q8R1T1 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chmp7Q8R1T1 Gm14704-201ENSMUST00000120300 874 ntBASIC16.79■□□□□ 0.28
Chmp7Q8R1T1 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Chmp7Q8R1T1 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC16.79■□□□□ 0.28
Chmp7Q8R1T1 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC16.79■□□□□ 0.28
Chmp7Q8R1T1 Gm2383-201ENSMUST00000181461 807 ntBASIC16.79■□□□□ 0.28
Chmp7Q8R1T1 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC16.79■□□□□ 0.28
Chmp7Q8R1T1 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chmp7Q8R1T1 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC16.79■□□□□ 0.28
Chmp7Q8R1T1 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Chmp7Q8R1T1 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chmp7Q8R1T1 Gm6015-201ENSMUST00000217493 1586 ntBASIC16.79■□□□□ 0.28
Chmp7Q8R1T1 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chmp7Q8R1T1 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Chmp7Q8R1T1 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chmp7Q8R1T1 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chmp7Q8R1T1 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC16.79■□□□□ 0.28
Chmp7Q8R1T1 Gm44775-201ENSMUST00000207266 1456 ntBASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms