Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccdc40Q8BI79 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc40Q8BI79 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc40Q8BI79 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc40Q8BI79 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc40Q8BI79 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc40Q8BI79 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc40Q8BI79 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc40Q8BI79 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc40Q8BI79 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Ccdc40Q8BI79 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc40Q8BI79 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc40Q8BI79 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc40Q8BI79 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc40Q8BI79 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc40Q8BI79 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC13.82□□□□□ -0.2
Ccdc40Q8BI79 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC13.82□□□□□ -0.2
Ccdc40Q8BI79 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc40Q8BI79 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc40Q8BI79 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc40Q8BI79 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc40Q8BI79 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc40Q8BI79 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc40Q8BI79 Gm5279-201ENSMUST00000199575 745 ntBASIC13.82□□□□□ -0.2
Ccdc40Q8BI79 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC13.82□□□□□ -0.2
Ccdc40Q8BI79 Gm17330-201ENSMUST00000221047 165 ntBASIC13.82□□□□□ -0.2
Ccdc40Q8BI79 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc40Q8BI79 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc40Q8BI79 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
Ccdc40Q8BI79 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc40Q8BI79 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc40Q8BI79 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Ccdc40Q8BI79 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc40Q8BI79 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc40Q8BI79 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Ccdc40Q8BI79 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc40Q8BI79 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc40Q8BI79 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC13.82□□□□□ -0.2
Ccdc40Q8BI79 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc40Q8BI79 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc40Q8BI79 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc40Q8BI79 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc40Q8BI79 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Ccdc40Q8BI79 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
Ccdc40Q8BI79 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Ccdc40Q8BI79 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc40Q8BI79 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc40Q8BI79 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc40Q8BI79 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc40Q8BI79 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc40Q8BI79 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc40Q8BI79 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc40Q8BI79 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc40Q8BI79 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc40Q8BI79 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc40Q8BI79 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc40Q8BI79 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc40Q8BI79 AC139054.1-201ENSMUST00000226898 1598 ntBASIC13.81□□□□□ -0.2
Ccdc40Q8BI79 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Ccdc40Q8BI79 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc40Q8BI79 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Ccdc40Q8BI79 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Ccdc40Q8BI79 Gm22189-201ENSMUST00000103822 86 ntBASIC13.81□□□□□ -0.2
Ccdc40Q8BI79 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc40Q8BI79 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC13.81□□□□□ -0.2
Ccdc40Q8BI79 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
Ccdc40Q8BI79 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC13.81□□□□□ -0.2
Ccdc40Q8BI79 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC13.81□□□□□ -0.2
Ccdc40Q8BI79 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc40Q8BI79 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc40Q8BI79 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Ccdc40Q8BI79 Gm28760-201ENSMUST00000185995 736 ntBASIC13.81□□□□□ -0.2
Ccdc40Q8BI79 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc40Q8BI79 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC13.81□□□□□ -0.2
Ccdc40Q8BI79 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Ccdc40Q8BI79 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc40Q8BI79 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc40Q8BI79 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Ccdc40Q8BI79 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC13.81□□□□□ -0.2
Ccdc40Q8BI79 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc40Q8BI79 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc40Q8BI79 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc40Q8BI79 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc40Q8BI79 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc40Q8BI79 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc40Q8BI79 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc40Q8BI79 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc40Q8BI79 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
Ccdc40Q8BI79 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc40Q8BI79 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc40Q8BI79 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC13.8□□□□□ -0.2
Ccdc40Q8BI79 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc40Q8BI79 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
Ccdc40Q8BI79 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc40Q8BI79 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc40Q8BI79 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc40Q8BI79 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc40Q8BI79 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc40Q8BI79 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC13.8□□□□□ -0.2
Ccdc40Q8BI79 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms