Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Col5a2Q3U962 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC15.44■□□□□ 0.06
Col5a2Q3U962 AC166992.1-201ENSMUST00000216356 565 ntBASIC15.44■□□□□ 0.06
Col5a2Q3U962 AC122876.1-201ENSMUST00000217619 825 ntBASIC15.44■□□□□ 0.06
Col5a2Q3U962 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC15.44■□□□□ 0.06
Col5a2Q3U962 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Col5a2Q3U962 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Col5a2Q3U962 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Col5a2Q3U962 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Col5a2Q3U962 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC15.44■□□□□ 0.06
Col5a2Q3U962 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Col5a2Q3U962 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Col5a2Q3U962 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Col5a2Q3U962 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Col5a2Q3U962 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Col5a2Q3U962 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Col5a2Q3U962 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC15.43■□□□□ 0.06
Col5a2Q3U962 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Col5a2Q3U962 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Col5a2Q3U962 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Col5a2Q3U962 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Col5a2Q3U962 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC15.43■□□□□ 0.06
Col5a2Q3U962 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC15.43■□□□□ 0.06
Col5a2Q3U962 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC15.43■□□□□ 0.06
Col5a2Q3U962 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Col5a2Q3U962 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Col5a2Q3U962 Gm19459-201ENSMUST00000176240 835 ntBASIC15.43■□□□□ 0.06
Col5a2Q3U962 Gm7600-201ENSMUST00000209657 785 ntBASIC15.43■□□□□ 0.06
Col5a2Q3U962 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Col5a2Q3U962 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Col5a2Q3U962 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Col5a2Q3U962 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Col5a2Q3U962 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Col5a2Q3U962 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Col5a2Q3U962 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Col5a2Q3U962 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC15.43■□□□□ 0.06
Col5a2Q3U962 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Col5a2Q3U962 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Col5a2Q3U962 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Col5a2Q3U962 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Col5a2Q3U962 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC15.42■□□□□ 0.06
Col5a2Q3U962 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Col5a2Q3U962 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC15.42■□□□□ 0.06
Col5a2Q3U962 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Col5a2Q3U962 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Col5a2Q3U962 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC15.42■□□□□ 0.06
Col5a2Q3U962 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC15.42■□□□□ 0.06
Col5a2Q3U962 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Col5a2Q3U962 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Col5a2Q3U962 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Col5a2Q3U962 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Col5a2Q3U962 Gm16296-201ENSMUST00000159905 325 ntBASIC15.42■□□□□ 0.06
Col5a2Q3U962 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC15.42■□□□□ 0.06
Col5a2Q3U962 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC15.42■□□□□ 0.06
Col5a2Q3U962 Gm17391-201ENSMUST00000171036 126 ntBASIC15.42■□□□□ 0.06
Col5a2Q3U962 Gm6407-201ENSMUST00000176468 549 ntBASIC15.42■□□□□ 0.06
Col5a2Q3U962 Gm37419-201ENSMUST00000210705 114 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Col5a2Q3U962 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC15.42■□□□□ 0.06
Col5a2Q3U962 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Col5a2Q3U962 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Col5a2Q3U962 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Col5a2Q3U962 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Col5a2Q3U962 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Col5a2Q3U962 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Col5a2Q3U962 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Col5a2Q3U962 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
Col5a2Q3U962 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Col5a2Q3U962 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Col5a2Q3U962 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Col5a2Q3U962 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Col5a2Q3U962 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Col5a2Q3U962 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Col5a2Q3U962 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Col5a2Q3U962 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Col5a2Q3U962 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Col5a2Q3U962 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Col5a2Q3U962 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Col5a2Q3U962 Gm28182-201ENSMUST00000188354 2477 ntBASIC15.42■□□□□ 0.06
Col5a2Q3U962 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Col5a2Q3U962 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Col5a2Q3U962 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Col5a2Q3U962 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Col5a2Q3U962 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Col5a2Q3U962 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Col5a2Q3U962 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Col5a2Q3U962 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Col5a2Q3U962 Gm11941-201ENSMUST00000119904 610 ntBASIC15.41■□□□□ 0.06
Col5a2Q3U962 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC15.41■□□□□ 0.06
Col5a2Q3U962 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
Col5a2Q3U962 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
Col5a2Q3U962 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC15.41■□□□□ 0.06
Col5a2Q3U962 Aprt-ps-201ENSMUST00000212311 505 ntBASIC15.41■□□□□ 0.06
Col5a2Q3U962 Gm39404-201ENSMUST00000216350 313 ntBASIC15.41■□□□□ 0.06
Col5a2Q3U962 AC159205.5-202ENSMUST00000224849 386 ntBASIC15.41■□□□□ 0.06
Col5a2Q3U962 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC15.41■□□□□ 0.06
Col5a2Q3U962 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC15.41■□□□□ 0.06
Col5a2Q3U962 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC15.41■□□□□ 0.06
Col5a2Q3U962 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Col5a2Q3U962 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Col5a2Q3U962 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms