Protein–RNA interactions for Protein: P10629

Hoxc6, Homeobox protein Hox-C6, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc6P10629 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC14.57□□□□□ -0.08
Hoxc6P10629 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Hoxc6P10629 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hoxc6P10629 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hoxc6P10629 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hoxc6P10629 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hoxc6P10629 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hoxc6P10629 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC14.57□□□□□ -0.08
Hoxc6P10629 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Hoxc6P10629 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC14.57□□□□□ -0.08
Hoxc6P10629 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Hoxc6P10629 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hoxc6P10629 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Hoxc6P10629 Gm14130-201ENSMUST00000118417 987 ntBASIC14.57□□□□□ -0.08
Hoxc6P10629 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC14.57□□□□□ -0.08
Hoxc6P10629 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hoxc6P10629 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
Hoxc6P10629 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Hoxc6P10629 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hoxc6P10629 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Hoxc6P10629 Gm2546-201ENSMUST00000182630 991 ntBASIC14.57□□□□□ -0.08
Hoxc6P10629 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC14.57□□□□□ -0.08
Hoxc6P10629 Gm8885-201ENSMUST00000189382 598 ntBASIC14.57□□□□□ -0.08
Hoxc6P10629 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC14.57□□□□□ -0.08
Hoxc6P10629 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Hoxc6P10629 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC14.57□□□□□ -0.08
Hoxc6P10629 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Hoxc6P10629 Abhd11os-203ENSMUST00000222613 363 ntBASIC14.57□□□□□ -0.08
Hoxc6P10629 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hoxc6P10629 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hoxc6P10629 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hoxc6P10629 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC14.57□□□□□ -0.08
Hoxc6P10629 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hoxc6P10629 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
Hoxc6P10629 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Hoxc6P10629 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hoxc6P10629 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hoxc6P10629 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hoxc6P10629 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hoxc6P10629 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hoxc6P10629 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hoxc6P10629 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hoxc6P10629 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC14.57□□□□□ -0.08
Hoxc6P10629 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC14.57□□□□□ -0.08
Hoxc6P10629 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hoxc6P10629 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Hoxc6P10629 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Hoxc6P10629 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Hoxc6P10629 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC14.56□□□□□ -0.08
Hoxc6P10629 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Hoxc6P10629 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC14.56□□□□□ -0.08
Hoxc6P10629 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Hoxc6P10629 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Hoxc6P10629 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC14.56□□□□□ -0.08
Hoxc6P10629 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Hoxc6P10629 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Hoxc6P10629 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Hoxc6P10629 Gm7857-201ENSMUST00000117957 358 ntBASIC14.56□□□□□ -0.08
Hoxc6P10629 Gm13665-201ENSMUST00000120830 528 ntBASIC14.56□□□□□ -0.08
Hoxc6P10629 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Hoxc6P10629 Gm22902-201ENSMUST00000158488 302 ntBASIC14.56□□□□□ -0.08
Hoxc6P10629 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC14.56□□□□□ -0.08
Hoxc6P10629 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Hoxc6P10629 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC14.56□□□□□ -0.08
Hoxc6P10629 Mir6979-201ENSMUST00000183927 56 ntBASIC14.56□□□□□ -0.08
Hoxc6P10629 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC14.56□□□□□ -0.08
Hoxc6P10629 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Hoxc6P10629 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Hoxc6P10629 Gm38297-201ENSMUST00000195122 1057 ntBASIC14.56□□□□□ -0.08
Hoxc6P10629 Gstp-ps-201ENSMUST00000195526 631 ntBASIC14.56□□□□□ -0.08
Hoxc6P10629 Gm9678-201ENSMUST00000198979 1149 ntBASIC14.56□□□□□ -0.08
Hoxc6P10629 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC14.56□□□□□ -0.08
Hoxc6P10629 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC14.56□□□□□ -0.08
Hoxc6P10629 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Hoxc6P10629 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC14.56□□□□□ -0.08
Hoxc6P10629 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Hoxc6P10629 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Hoxc6P10629 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Hoxc6P10629 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Hoxc6P10629 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Hoxc6P10629 Gm43273-201ENSMUST00000199649 2594 ntBASIC14.56□□□□□ -0.08
Hoxc6P10629 Gm19221-201ENSMUST00000221827 1477 ntBASIC14.56□□□□□ -0.08
Hoxc6P10629 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Hoxc6P10629 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Hoxc6P10629 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Hoxc6P10629 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Hoxc6P10629 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Hoxc6P10629 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Hoxc6P10629 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Hoxc6P10629 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC14.55□□□□□ -0.08
Hoxc6P10629 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Hoxc6P10629 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Hoxc6P10629 Gm5639-201ENSMUST00000122305 2403 ntBASIC14.55□□□□□ -0.08
Hoxc6P10629 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Hoxc6P10629 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
Hoxc6P10629 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Hoxc6P10629 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Hoxc6P10629 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Hoxc6P10629 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Hoxc6P10629 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms