Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.39
SHANK2Q9UPX8 TP73-213ENST00000604479 1623 ntTSL 5 BASIC23.7■■□□□ 1.39
SHANK2Q9UPX8 AC011477.6-201ENST00000604980 1927 ntBASIC23.7■■□□□ 1.38
SHANK2Q9UPX8 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
SHANK2Q9UPX8 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC23.7■■□□□ 1.38
SHANK2Q9UPX8 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC23.7■■□□□ 1.38
SHANK2Q9UPX8 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.38
SHANK2Q9UPX8 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
SHANK2Q9UPX8 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC23.7■■□□□ 1.38
SHANK2Q9UPX8 AL133267.1-201ENST00000398220 340 ntBASIC23.7■■□□□ 1.38
SHANK2Q9UPX8 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
SHANK2Q9UPX8 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC23.7■■□□□ 1.38
SHANK2Q9UPX8 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
SHANK2Q9UPX8 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC23.7■■□□□ 1.38
SHANK2Q9UPX8 AL022328.1-201ENST00000610050 478 ntBASIC23.7■■□□□ 1.38
SHANK2Q9UPX8 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC23.7■■□□□ 1.38
SHANK2Q9UPX8 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC23.7■■□□□ 1.38
SHANK2Q9UPX8 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
SHANK2Q9UPX8 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
SHANK2Q9UPX8 AC080080.1-201ENST00000625121 2420 ntBASIC23.7■■□□□ 1.38
SHANK2Q9UPX8 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC23.7■■□□□ 1.38
SHANK2Q9UPX8 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
SHANK2Q9UPX8 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC23.69■■□□□ 1.38
SHANK2Q9UPX8 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
SHANK2Q9UPX8 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
SHANK2Q9UPX8 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
SHANK2Q9UPX8 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC23.69■■□□□ 1.38
SHANK2Q9UPX8 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC23.69■■□□□ 1.38
SHANK2Q9UPX8 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
SHANK2Q9UPX8 LBX2-201ENST00000341396 886 ntTSL 3 BASIC23.69■■□□□ 1.38
SHANK2Q9UPX8 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC23.69■■□□□ 1.38
SHANK2Q9UPX8 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
SHANK2Q9UPX8 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
SHANK2Q9UPX8 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC23.69■■□□□ 1.38
SHANK2Q9UPX8 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC23.69■■□□□ 1.38
SHANK2Q9UPX8 RPL28-203ENST00000428193 573 ntTSL 2 BASIC23.69■■□□□ 1.38
SHANK2Q9UPX8 AC099548.2-209ENST00000480264 625 ntBASIC23.69■■□□□ 1.38
SHANK2Q9UPX8 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC23.69■■□□□ 1.38
SHANK2Q9UPX8 PTP4A1P2-201ENST00000546033 454 ntBASIC23.69■■□□□ 1.38
SHANK2Q9UPX8 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC23.69■■□□□ 1.38
SHANK2Q9UPX8 RPL28-207ENST00000558815 616 ntTSL 2 BASIC23.69■■□□□ 1.38
SHANK2Q9UPX8 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC23.69■■□□□ 1.38
SHANK2Q9UPX8 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC23.69■■□□□ 1.38
SHANK2Q9UPX8 ATF5-205ENST00000600336 682 ntTSL 2 BASIC23.69■■□□□ 1.38
SHANK2Q9UPX8 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC23.69■■□□□ 1.38
SHANK2Q9UPX8 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC23.69■■□□□ 1.38
SHANK2Q9UPX8 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
SHANK2Q9UPX8 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
SHANK2Q9UPX8 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC23.69■■□□□ 1.38
SHANK2Q9UPX8 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC23.69■■□□□ 1.38
SHANK2Q9UPX8 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC23.69■■□□□ 1.38
SHANK2Q9UPX8 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
SHANK2Q9UPX8 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
SHANK2Q9UPX8 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
SHANK2Q9UPX8 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
SHANK2Q9UPX8 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC23.69■■□□□ 1.38
SHANK2Q9UPX8 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
SHANK2Q9UPX8 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
SHANK2Q9UPX8 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
SHANK2Q9UPX8 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
SHANK2Q9UPX8 BRF1-202ENST00000379932 884 ntTSL 5 BASIC23.68■■□□□ 1.38
SHANK2Q9UPX8 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC23.68■■□□□ 1.38
SHANK2Q9UPX8 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
SHANK2Q9UPX8 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
SHANK2Q9UPX8 CTBP2P5-201ENST00000454986 1264 ntBASIC23.68■■□□□ 1.38
SHANK2Q9UPX8 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC23.68■■□□□ 1.38
SHANK2Q9UPX8 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC23.68■■□□□ 1.38
SHANK2Q9UPX8 SLC25A47P1-201ENST00000531577 414 ntBASIC23.68■■□□□ 1.38
SHANK2Q9UPX8 AP000812.2-201ENST00000538934 718 ntBASIC23.68■■□□□ 1.38
SHANK2Q9UPX8 AL583810.1-201ENST00000553344 1045 ntBASIC23.68■■□□□ 1.38
SHANK2Q9UPX8 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
SHANK2Q9UPX8 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
SHANK2Q9UPX8 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
SHANK2Q9UPX8 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
SHANK2Q9UPX8 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
SHANK2Q9UPX8 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
SHANK2Q9UPX8 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC23.68■■□□□ 1.38
SHANK2Q9UPX8 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
SHANK2Q9UPX8 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
SHANK2Q9UPX8 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
SHANK2Q9UPX8 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
SHANK2Q9UPX8 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
SHANK2Q9UPX8 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
SHANK2Q9UPX8 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
SHANK2Q9UPX8 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC23.68■■□□□ 1.38
SHANK2Q9UPX8 MSTO2P-201ENST00000314835 1709 ntBASIC23.68■■□□□ 1.38
SHANK2Q9UPX8 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
SHANK2Q9UPX8 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC23.68■■□□□ 1.38
SHANK2Q9UPX8 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
SHANK2Q9UPX8 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
SHANK2Q9UPX8 RAC2-202ENST00000401529 569 ntTSL 4 BASIC23.68■■□□□ 1.38
SHANK2Q9UPX8 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
SHANK2Q9UPX8 AC022137.2-201ENST00000503482 481 ntBASIC23.68■■□□□ 1.38
SHANK2Q9UPX8 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC23.68■■□□□ 1.38
SHANK2Q9UPX8 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC23.68■■□□□ 1.38
SHANK2Q9UPX8 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC23.68■■□□□ 1.38
SHANK2Q9UPX8 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC23.68■■□□□ 1.38
SHANK2Q9UPX8 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
SHANK2Q9UPX8 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
SHANK2Q9UPX8 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms