Protein–RNA interactions for Protein: Q9QXG2

Chm, Rab proteins geranylgeranyltransferase component A 1, mousemouse

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChmQ9QXG2 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ChmQ9QXG2 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ChmQ9QXG2 Zkscan3-207ENSMUST00000223831 2101 ntBASIC14.21□□□□□ -0.13
ChmQ9QXG2 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
ChmQ9QXG2 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC14.21□□□□□ -0.14
ChmQ9QXG2 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
ChmQ9QXG2 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
ChmQ9QXG2 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
ChmQ9QXG2 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
ChmQ9QXG2 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC14.21□□□□□ -0.14
ChmQ9QXG2 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
ChmQ9QXG2 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
ChmQ9QXG2 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
ChmQ9QXG2 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
ChmQ9QXG2 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ChmQ9QXG2 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ChmQ9QXG2 Gm45266-201ENSMUST00000210111 2173 ntBASIC14.2□□□□□ -0.14
ChmQ9QXG2 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
ChmQ9QXG2 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
ChmQ9QXG2 Gm42466-201ENSMUST00000202099 1301 ntBASIC14.2□□□□□ -0.14
ChmQ9QXG2 Gm45667-201ENSMUST00000210380 1316 ntBASIC14.2□□□□□ -0.14
ChmQ9QXG2 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ChmQ9QXG2 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
ChmQ9QXG2 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
ChmQ9QXG2 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
ChmQ9QXG2 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ChmQ9QXG2 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
ChmQ9QXG2 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ChmQ9QXG2 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ChmQ9QXG2 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
ChmQ9QXG2 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ChmQ9QXG2 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ChmQ9QXG2 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
ChmQ9QXG2 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ChmQ9QXG2 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ChmQ9QXG2 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC14.2□□□□□ -0.14
ChmQ9QXG2 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC14.2□□□□□ -0.14
ChmQ9QXG2 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ChmQ9QXG2 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ChmQ9QXG2 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
ChmQ9QXG2 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ChmQ9QXG2 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
ChmQ9QXG2 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
ChmQ9QXG2 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ChmQ9QXG2 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ChmQ9QXG2 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
ChmQ9QXG2 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
ChmQ9QXG2 Gm5466-201ENSMUST00000119395 1890 ntBASIC14.2□□□□□ -0.14
ChmQ9QXG2 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
ChmQ9QXG2 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ChmQ9QXG2 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
ChmQ9QXG2 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ChmQ9QXG2 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ChmQ9QXG2 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ChmQ9QXG2 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
ChmQ9QXG2 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
ChmQ9QXG2 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
ChmQ9QXG2 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ChmQ9QXG2 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ChmQ9QXG2 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ChmQ9QXG2 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ChmQ9QXG2 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ChmQ9QXG2 Gm43045-201ENSMUST00000198725 2095 ntBASIC14.19□□□□□ -0.14
ChmQ9QXG2 Gm44758-201ENSMUST00000206096 2068 ntBASIC14.19□□□□□ -0.14
ChmQ9QXG2 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
ChmQ9QXG2 AC166574.4-201ENSMUST00000227165 1937 ntBASIC14.19□□□□□ -0.14
ChmQ9QXG2 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
ChmQ9QXG2 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
ChmQ9QXG2 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
ChmQ9QXG2 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC14.19□□□□□ -0.14
ChmQ9QXG2 Gm6018-201ENSMUST00000216090 1306 ntBASIC14.19□□□□□ -0.14
ChmQ9QXG2 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ChmQ9QXG2 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ChmQ9QXG2 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
ChmQ9QXG2 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
ChmQ9QXG2 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
ChmQ9QXG2 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ChmQ9QXG2 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC14.19□□□□□ -0.14
ChmQ9QXG2 Gm6539-201ENSMUST00000119157 1064 ntBASIC14.19□□□□□ -0.14
ChmQ9QXG2 Gm12017-201ENSMUST00000122453 1003 ntBASIC14.19□□□□□ -0.14
ChmQ9QXG2 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC14.19□□□□□ -0.14
ChmQ9QXG2 Gm18889-201ENSMUST00000174284 929 ntBASIC14.19□□□□□ -0.14
ChmQ9QXG2 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
ChmQ9QXG2 Gm45453-201ENSMUST00000211758 853 ntBASIC14.19□□□□□ -0.14
ChmQ9QXG2 Gm5628-201ENSMUST00000222318 1049 ntBASIC14.19□□□□□ -0.14
ChmQ9QXG2 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
ChmQ9QXG2 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
ChmQ9QXG2 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ChmQ9QXG2 Mir125a-201ENSMUST00000083545 68 ntBASIC14.19□□□□□ -0.14
ChmQ9QXG2 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
ChmQ9QXG2 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ChmQ9QXG2 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ChmQ9QXG2 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
ChmQ9QXG2 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ChmQ9QXG2 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
ChmQ9QXG2 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ChmQ9QXG2 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
ChmQ9QXG2 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ChmQ9QXG2 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ChmQ9QXG2 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms