Protein–RNA interactions for Protein: Q8C1Q6

Smim4, Small integral membrane protein 4, mousemouse

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim4Q8C1Q6 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Smim4Q8C1Q6 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Smim4Q8C1Q6 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC11.1□□□□□ -0.63
Smim4Q8C1Q6 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Smim4Q8C1Q6 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Smim4Q8C1Q6 Gm43423-201ENSMUST00000198390 2094 ntBASIC11.1□□□□□ -0.63
Smim4Q8C1Q6 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Smim4Q8C1Q6 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Smim4Q8C1Q6 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Smim4Q8C1Q6 Gm43273-201ENSMUST00000199649 2594 ntBASIC11.1□□□□□ -0.63
Smim4Q8C1Q6 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Smim4Q8C1Q6 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC11.1□□□□□ -0.63
Smim4Q8C1Q6 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Smim4Q8C1Q6 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smim4Q8C1Q6 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Smim4Q8C1Q6 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smim4Q8C1Q6 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Smim4Q8C1Q6 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smim4Q8C1Q6 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smim4Q8C1Q6 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Smim4Q8C1Q6 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Smim4Q8C1Q6 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Smim4Q8C1Q6 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Smim4Q8C1Q6 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smim4Q8C1Q6 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC11.09□□□□□ -0.63
Smim4Q8C1Q6 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC11.09□□□□□ -0.63
Smim4Q8C1Q6 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smim4Q8C1Q6 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smim4Q8C1Q6 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smim4Q8C1Q6 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Smim4Q8C1Q6 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC11.09□□□□□ -0.63
Smim4Q8C1Q6 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smim4Q8C1Q6 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smim4Q8C1Q6 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smim4Q8C1Q6 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smim4Q8C1Q6 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smim4Q8C1Q6 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smim4Q8C1Q6 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smim4Q8C1Q6 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smim4Q8C1Q6 Gm7002-201ENSMUST00000221386 2165 ntBASIC11.09□□□□□ -0.63
Smim4Q8C1Q6 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC11.09□□□□□ -0.63
Smim4Q8C1Q6 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smim4Q8C1Q6 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smim4Q8C1Q6 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smim4Q8C1Q6 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smim4Q8C1Q6 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smim4Q8C1Q6 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smim4Q8C1Q6 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC11.09□□□□□ -0.63
Smim4Q8C1Q6 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC11.09□□□□□ -0.63
Smim4Q8C1Q6 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Smim4Q8C1Q6 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC11.09□□□□□ -0.63
Smim4Q8C1Q6 Gm38144-201ENSMUST00000192790 465 ntBASIC11.09□□□□□ -0.63
Smim4Q8C1Q6 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC11.09□□□□□ -0.63
Smim4Q8C1Q6 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Smim4Q8C1Q6 Gm45841-201ENSMUST00000207700 164 ntBASIC11.09□□□□□ -0.63
Smim4Q8C1Q6 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smim4Q8C1Q6 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Smim4Q8C1Q6 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smim4Q8C1Q6 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smim4Q8C1Q6 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Smim4Q8C1Q6 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smim4Q8C1Q6 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Smim4Q8C1Q6 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Smim4Q8C1Q6 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smim4Q8C1Q6 AC122314.1-201ENSMUST00000223056 2239 ntBASIC11.09□□□□□ -0.63
Smim4Q8C1Q6 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smim4Q8C1Q6 Gm45706-201ENSMUST00000213063 2136 ntBASIC11.09□□□□□ -0.63
Smim4Q8C1Q6 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smim4Q8C1Q6 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Smim4Q8C1Q6 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smim4Q8C1Q6 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Smim4Q8C1Q6 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Smim4Q8C1Q6 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Smim4Q8C1Q6 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smim4Q8C1Q6 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC11.09□□□□□ -0.63
Smim4Q8C1Q6 AC137842.1-201ENSMUST00000227896 2064 ntBASIC11.08□□□□□ -0.63
Smim4Q8C1Q6 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.63
Smim4Q8C1Q6 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.63
Smim4Q8C1Q6 AC153366.2-201ENSMUST00000219461 1984 ntBASIC11.08□□□□□ -0.64
Smim4Q8C1Q6 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Smim4Q8C1Q6 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Smim4Q8C1Q6 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Smim4Q8C1Q6 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Smim4Q8C1Q6 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Smim4Q8C1Q6 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Smim4Q8C1Q6 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Smim4Q8C1Q6 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Smim4Q8C1Q6 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Smim4Q8C1Q6 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Smim4Q8C1Q6 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Smim4Q8C1Q6 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Smim4Q8C1Q6 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Smim4Q8C1Q6 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Smim4Q8C1Q6 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC11.08□□□□□ -0.64
Smim4Q8C1Q6 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC11.08□□□□□ -0.64
Smim4Q8C1Q6 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Smim4Q8C1Q6 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC11.08□□□□□ -0.64
Smim4Q8C1Q6 Gm12485-201ENSMUST00000119641 291 ntBASIC11.08□□□□□ -0.64
Smim4Q8C1Q6 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC11.08□□□□□ -0.64
Smim4Q8C1Q6 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms