Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Nkx2-1P50220 Gm37269-201ENSMUST00000193906 1891 ntBASIC10.95□□□□□ -0.66
Nkx2-1P50220 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nkx2-1P50220 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Nkx2-1P50220 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Nkx2-1P50220 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Nkx2-1P50220 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nkx2-1P50220 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nkx2-1P50220 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nkx2-1P50220 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC10.95□□□□□ -0.66
Nkx2-1P50220 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nkx2-1P50220 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Nkx2-1P50220 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nkx2-1P50220 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
Nkx2-1P50220 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nkx2-1P50220 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Nkx2-1P50220 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nkx2-1P50220 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nkx2-1P50220 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nkx2-1P50220 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Nkx2-1P50220 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Nkx2-1P50220 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC10.95□□□□□ -0.66
Nkx2-1P50220 Gm14822-201ENSMUST00000122247 291 ntBASIC10.95□□□□□ -0.66
Nkx2-1P50220 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC10.95□□□□□ -0.66
Nkx2-1P50220 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC10.95□□□□□ -0.66
Nkx2-1P50220 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nkx2-1P50220 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC10.95□□□□□ -0.66
Nkx2-1P50220 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nkx2-1P50220 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC10.95□□□□□ -0.66
Nkx2-1P50220 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nkx2-1P50220 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Nkx2-1P50220 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Nkx2-1P50220 Gm3695-201ENSMUST00000087222 1009 ntBASIC10.95□□□□□ -0.66
Nkx2-1P50220 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Nkx2-1P50220 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nkx2-1P50220 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nkx2-1P50220 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC10.95□□□□□ -0.66
Nkx2-1P50220 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Nkx2-1P50220 Gm37472-201ENSMUST00000192342 4052 ntBASIC10.95□□□□□ -0.66
Nkx2-1P50220 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Nkx2-1P50220 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nkx2-1P50220 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Nkx2-1P50220 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nkx2-1P50220 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nkx2-1P50220 AC164107.1-201ENSMUST00000227730 2161 ntBASIC10.94□□□□□ -0.66
Nkx2-1P50220 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx2-1P50220 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Nkx2-1P50220 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx2-1P50220 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx2-1P50220 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Nkx2-1P50220 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx2-1P50220 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx2-1P50220 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx2-1P50220 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx2-1P50220 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx2-1P50220 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx2-1P50220 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC10.94□□□□□ -0.66
Nkx2-1P50220 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx2-1P50220 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Nkx2-1P50220 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx2-1P50220 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Nkx2-1P50220 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx2-1P50220 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC10.94□□□□□ -0.66
Nkx2-1P50220 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx2-1P50220 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC10.94□□□□□ -0.66
Nkx2-1P50220 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx2-1P50220 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC10.94□□□□□ -0.66
Nkx2-1P50220 Gm6736-201ENSMUST00000166583 948 ntBASIC10.94□□□□□ -0.66
Nkx2-1P50220 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC10.94□□□□□ -0.66
Nkx2-1P50220 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx2-1P50220 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx2-1P50220 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx2-1P50220 Gm6916-202ENSMUST00000205523 195 ntBASIC10.94□□□□□ -0.66
Nkx2-1P50220 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC10.94□□□□□ -0.66
Nkx2-1P50220 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Nkx2-1P50220 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx2-1P50220 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx2-1P50220 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx2-1P50220 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx2-1P50220 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx2-1P50220 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx2-1P50220 Gm7049-201ENSMUST00000223520 1712 ntBASIC10.94□□□□□ -0.66
Nkx2-1P50220 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx2-1P50220 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx2-1P50220 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC10.94□□□□□ -0.66
Nkx2-1P50220 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx2-1P50220 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC10.94□□□□□ -0.66
Nkx2-1P50220 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Nkx2-1P50220 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx2-1P50220 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx2-1P50220 Gm28323-201ENSMUST00000186817 2499 ntBASIC10.94□□□□□ -0.66
Nkx2-1P50220 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx2-1P50220 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx2-1P50220 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx2-1P50220 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx2-1P50220 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx2-1P50220 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx2-1P50220 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx2-1P50220 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx2-1P50220 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 63.1 ms