Protein–RNA interactions for Protein: P49135

Ercc3, General transcription and DNA repair factor IIH helicase subunit XPB, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc3P49135 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Ercc3P49135 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ercc3P49135 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC15.7■□□□□ 0.1
Ercc3P49135 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC15.7■□□□□ 0.1
Ercc3P49135 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ercc3P49135 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ercc3P49135 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ercc3P49135 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ercc3P49135 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Ercc3P49135 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ercc3P49135 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ercc3P49135 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ercc3P49135 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ercc3P49135 Gm5687-201ENSMUST00000118252 640 ntBASIC15.7■□□□□ 0.1
Ercc3P49135 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
Ercc3P49135 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC15.7■□□□□ 0.1
Ercc3P49135 Gm18473-201ENSMUST00000220543 868 ntBASIC15.7■□□□□ 0.1
Ercc3P49135 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ercc3P49135 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ercc3P49135 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ercc3P49135 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ercc3P49135 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Ercc3P49135 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ercc3P49135 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
Ercc3P49135 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ercc3P49135 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ercc3P49135 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
Ercc3P49135 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ercc3P49135 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
Ercc3P49135 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Ercc3P49135 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ercc3P49135 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ercc3P49135 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ercc3P49135 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ercc3P49135 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ercc3P49135 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ercc3P49135 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ercc3P49135 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC15.69■□□□□ 0.1
Ercc3P49135 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ercc3P49135 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ercc3P49135 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ercc3P49135 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ercc3P49135 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC15.69■□□□□ 0.1
Ercc3P49135 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC15.69■□□□□ 0.1
Ercc3P49135 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
Ercc3P49135 AC110817.1-201ENSMUST00000225706 605 ntBASIC15.69■□□□□ 0.1
Ercc3P49135 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ercc3P49135 Gm6091-201ENSMUST00000098307 165 ntBASIC15.69■□□□□ 0.1
Ercc3P49135 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ercc3P49135 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Ercc3P49135 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ercc3P49135 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ercc3P49135 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ercc3P49135 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ercc3P49135 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ercc3P49135 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Ercc3P49135 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ercc3P49135 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ercc3P49135 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ercc3P49135 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ercc3P49135 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Ercc3P49135 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ercc3P49135 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ercc3P49135 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC15.68■□□□□ 0.1
Ercc3P49135 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC15.68■□□□□ 0.1
Ercc3P49135 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ercc3P49135 Gm15222-202ENSMUST00000228667 1726 ntBASIC15.68■□□□□ 0.1
Ercc3P49135 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Ercc3P49135 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Ercc3P49135 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ercc3P49135 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ercc3P49135 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ercc3P49135 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ercc3P49135 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ercc3P49135 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ercc3P49135 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Ercc3P49135 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ercc3P49135 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ercc3P49135 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC15.68■□□□□ 0.1
Ercc3P49135 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Ercc3P49135 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ercc3P49135 Gm5466-201ENSMUST00000119395 1890 ntBASIC15.68■□□□□ 0.1
Ercc3P49135 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Ercc3P49135 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ercc3P49135 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ercc3P49135 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ercc3P49135 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ercc3P49135 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC15.68■□□□□ 0.1
Ercc3P49135 Gm18187-201ENSMUST00000196476 984 ntBASIC15.68■□□□□ 0.1
Ercc3P49135 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC15.68■□□□□ 0.1
Ercc3P49135 Gm44064-201ENSMUST00000204964 1087 ntBASIC15.68■□□□□ 0.1
Ercc3P49135 Gm44799-201ENSMUST00000207639 1202 ntBASIC15.68■□□□□ 0.1
Ercc3P49135 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ercc3P49135 AC154595.3-201ENSMUST00000224579 384 ntBASIC15.68■□□□□ 0.1
Ercc3P49135 AC155237.1-201ENSMUST00000226196 1279 ntBASIC15.68■□□□□ 0.1
Ercc3P49135 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ercc3P49135 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ercc3P49135 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ercc3P49135 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ercc3P49135 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms