Protein–RNA interactions for Protein: O88874

Ccnk, Cyclin-K, mousemouse

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcnkO88874 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
CcnkO88874 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CcnkO88874 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CcnkO88874 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
CcnkO88874 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CcnkO88874 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CcnkO88874 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
CcnkO88874 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CcnkO88874 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CcnkO88874 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CcnkO88874 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CcnkO88874 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
CcnkO88874 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
CcnkO88874 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CcnkO88874 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
CcnkO88874 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC11.8□□□□□ -0.52
CcnkO88874 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
CcnkO88874 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC11.8□□□□□ -0.52
CcnkO88874 Mir1897-201ENSMUST00000122581 272 ntBASIC11.8□□□□□ -0.52
CcnkO88874 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CcnkO88874 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CcnkO88874 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
CcnkO88874 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
CcnkO88874 Gm25948-201ENSMUST00000175334 112 ntBASIC11.8□□□□□ -0.52
CcnkO88874 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
CcnkO88874 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC11.8□□□□□ -0.52
CcnkO88874 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CcnkO88874 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CcnkO88874 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CcnkO88874 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC11.8□□□□□ -0.52
CcnkO88874 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CcnkO88874 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CcnkO88874 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CcnkO88874 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CcnkO88874 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
CcnkO88874 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
CcnkO88874 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CcnkO88874 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
CcnkO88874 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
CcnkO88874 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CcnkO88874 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CcnkO88874 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CcnkO88874 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CcnkO88874 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CcnkO88874 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
CcnkO88874 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CcnkO88874 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC11.8□□□□□ -0.52
CcnkO88874 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC11.8□□□□□ -0.52
CcnkO88874 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CcnkO88874 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
CcnkO88874 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CcnkO88874 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CcnkO88874 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CcnkO88874 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CcnkO88874 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
CcnkO88874 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CcnkO88874 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CcnkO88874 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CcnkO88874 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CcnkO88874 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
CcnkO88874 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CcnkO88874 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CcnkO88874 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
CcnkO88874 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
CcnkO88874 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CcnkO88874 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CcnkO88874 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
CcnkO88874 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CcnkO88874 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC11.79□□□□□ -0.52
CcnkO88874 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC11.79□□□□□ -0.52
CcnkO88874 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
CcnkO88874 Gm33320-201ENSMUST00000192232 530 ntBASIC11.79□□□□□ -0.52
CcnkO88874 Gm37714-201ENSMUST00000194742 342 ntBASIC11.79□□□□□ -0.52
CcnkO88874 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CcnkO88874 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CcnkO88874 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC11.79□□□□□ -0.52
CcnkO88874 Gm9229-201ENSMUST00000222777 126 ntBASIC11.79□□□□□ -0.52
CcnkO88874 AC149294.4-201ENSMUST00000227870 882 ntBASIC11.79□□□□□ -0.52
CcnkO88874 CT030704.2-201ENSMUST00000228887 494 ntBASIC11.79□□□□□ -0.52
CcnkO88874 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CcnkO88874 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
CcnkO88874 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
CcnkO88874 Gm37133-201ENSMUST00000192705 1922 ntBASIC11.79□□□□□ -0.52
CcnkO88874 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
CcnkO88874 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CcnkO88874 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
CcnkO88874 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
CcnkO88874 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
CcnkO88874 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
CcnkO88874 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CcnkO88874 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
CcnkO88874 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
CcnkO88874 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
CcnkO88874 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CcnkO88874 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CcnkO88874 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
CcnkO88874 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
CcnkO88874 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
CcnkO88874 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC11.78□□□□□ -0.52
CcnkO88874 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms