Protein–RNA interactions for Protein: E9PZM7

Scaf11, SR-related CTD-associated factor 11, mousemouse

Known RBP Predictions only

Length 1,456 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf11E9PZM7 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Scaf11E9PZM7 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Scaf11E9PZM7 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC18.14■□□□□ 0.49
Scaf11E9PZM7 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Scaf11E9PZM7 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Scaf11E9PZM7 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Scaf11E9PZM7 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC18.14■□□□□ 0.49
Scaf11E9PZM7 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Scaf11E9PZM7 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Scaf11E9PZM7 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Scaf11E9PZM7 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Scaf11E9PZM7 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC18.13■□□□□ 0.49
Scaf11E9PZM7 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Scaf11E9PZM7 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Scaf11E9PZM7 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Scaf11E9PZM7 Zkscan3-208ENSMUST00000224820 5398 ntBASIC18.13■□□□□ 0.49
Scaf11E9PZM7 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Scaf11E9PZM7 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC18.13■□□□□ 0.49
Scaf11E9PZM7 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC18.13■□□□□ 0.49
Scaf11E9PZM7 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Scaf11E9PZM7 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Scaf11E9PZM7 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC18.13■□□□□ 0.49
Scaf11E9PZM7 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Scaf11E9PZM7 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Scaf11E9PZM7 Gm6161-201ENSMUST00000121942 1102 ntBASIC18.13■□□□□ 0.49
Scaf11E9PZM7 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Scaf11E9PZM7 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Scaf11E9PZM7 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Scaf11E9PZM7 Gm6153-201ENSMUST00000172004 1058 ntBASIC18.13■□□□□ 0.49
Scaf11E9PZM7 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Scaf11E9PZM7 Gm5641-202ENSMUST00000198699 1080 ntBASIC18.13■□□□□ 0.49
Scaf11E9PZM7 Gm19287-201ENSMUST00000203190 358 ntBASIC18.13■□□□□ 0.49
Scaf11E9PZM7 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC18.13■□□□□ 0.49
Scaf11E9PZM7 Gm45925-201ENSMUST00000218882 744 ntBASIC18.13■□□□□ 0.49
Scaf11E9PZM7 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC18.13■□□□□ 0.49
Scaf11E9PZM7 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Scaf11E9PZM7 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Scaf11E9PZM7 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Scaf11E9PZM7 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Scaf11E9PZM7 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Scaf11E9PZM7 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Scaf11E9PZM7 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Scaf11E9PZM7 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Scaf11E9PZM7 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Scaf11E9PZM7 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Scaf11E9PZM7 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Scaf11E9PZM7 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
Scaf11E9PZM7 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Scaf11E9PZM7 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC18.12■□□□□ 0.49
Scaf11E9PZM7 Gm19187-201ENSMUST00000206781 892 ntBASIC18.12■□□□□ 0.49
Scaf11E9PZM7 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Scaf11E9PZM7 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC18.12■□□□□ 0.49
Scaf11E9PZM7 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC18.12■□□□□ 0.49
Scaf11E9PZM7 AC166344.1-202ENSMUST00000224139 234 ntBASIC18.12■□□□□ 0.49
Scaf11E9PZM7 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Scaf11E9PZM7 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Scaf11E9PZM7 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Scaf11E9PZM7 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Scaf11E9PZM7 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Scaf11E9PZM7 AC159308.2-201ENSMUST00000213592 2325 ntBASIC18.12■□□□□ 0.49
Scaf11E9PZM7 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Scaf11E9PZM7 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC18.12■□□□□ 0.49
Scaf11E9PZM7 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scaf11E9PZM7 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scaf11E9PZM7 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC18.11■□□□□ 0.49
Scaf11E9PZM7 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC18.11■□□□□ 0.49
Scaf11E9PZM7 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Scaf11E9PZM7 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scaf11E9PZM7 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scaf11E9PZM7 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scaf11E9PZM7 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scaf11E9PZM7 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Scaf11E9PZM7 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC18.11■□□□□ 0.49
Scaf11E9PZM7 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scaf11E9PZM7 Gm11340-201ENSMUST00000119226 412 ntBASIC18.11■□□□□ 0.49
Scaf11E9PZM7 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scaf11E9PZM7 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scaf11E9PZM7 Rn7s6-201ENSMUST00000175005 291 ntBASIC18.11■□□□□ 0.49
Scaf11E9PZM7 Gm29155-201ENSMUST00000185910 269 ntBASIC18.11■□□□□ 0.49
Scaf11E9PZM7 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC18.11■□□□□ 0.49
Scaf11E9PZM7 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Scaf11E9PZM7 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Scaf11E9PZM7 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scaf11E9PZM7 Rps18-ps3-201ENSMUST00000080443 456 ntBASIC18.11■□□□□ 0.49
Scaf11E9PZM7 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC18.11■□□□□ 0.49
Scaf11E9PZM7 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scaf11E9PZM7 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scaf11E9PZM7 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scaf11E9PZM7 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scaf11E9PZM7 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Scaf11E9PZM7 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Scaf11E9PZM7 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scaf11E9PZM7 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Scaf11E9PZM7 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Scaf11E9PZM7 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Scaf11E9PZM7 AC122197.2-201ENSMUST00000219196 1635 ntBASIC18.1■□□□□ 0.49
Scaf11E9PZM7 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Scaf11E9PZM7 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Scaf11E9PZM7 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Scaf11E9PZM7 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC18.1■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 77.6 ms