Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Gm7857-201ENSMUST00000117957 358 ntBASIC13.92□□□□□ -0.18
Clp1Q99LI9 Gm13665-201ENSMUST00000120830 528 ntBASIC13.92□□□□□ -0.18
Clp1Q99LI9 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC13.92□□□□□ -0.18
Clp1Q99LI9 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clp1Q99LI9 Gstp-ps-201ENSMUST00000195526 631 ntBASIC13.92□□□□□ -0.18
Clp1Q99LI9 Gm31048-201ENSMUST00000196103 1061 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Clp1Q99LI9 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC13.92□□□□□ -0.18
Clp1Q99LI9 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC13.92□□□□□ -0.18
Clp1Q99LI9 Gm19208-201ENSMUST00000213861 912 ntBASIC13.92□□□□□ -0.18
Clp1Q99LI9 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC13.92□□□□□ -0.18
Clp1Q99LI9 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clp1Q99LI9 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Clp1Q99LI9 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Clp1Q99LI9 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC13.92□□□□□ -0.18
Clp1Q99LI9 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clp1Q99LI9 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clp1Q99LI9 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clp1Q99LI9 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Clp1Q99LI9 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clp1Q99LI9 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC13.91□□□□□ -0.18
Clp1Q99LI9 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Clp1Q99LI9 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clp1Q99LI9 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Clp1Q99LI9 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clp1Q99LI9 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clp1Q99LI9 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clp1Q99LI9 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Clp1Q99LI9 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Clp1Q99LI9 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clp1Q99LI9 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clp1Q99LI9 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clp1Q99LI9 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC13.91□□□□□ -0.18
Clp1Q99LI9 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clp1Q99LI9 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clp1Q99LI9 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Clp1Q99LI9 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC13.91□□□□□ -0.18
Clp1Q99LI9 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Clp1Q99LI9 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Clp1Q99LI9 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Clp1Q99LI9 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Clp1Q99LI9 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC13.91□□□□□ -0.18
Clp1Q99LI9 Gm5597-201ENSMUST00000182353 1193 ntBASIC13.91□□□□□ -0.18
Clp1Q99LI9 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC13.91□□□□□ -0.18
Clp1Q99LI9 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Clp1Q99LI9 Gm8885-201ENSMUST00000189382 598 ntBASIC13.91□□□□□ -0.18
Clp1Q99LI9 Gm38297-201ENSMUST00000195122 1057 ntBASIC13.91□□□□□ -0.18
Clp1Q99LI9 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clp1Q99LI9 Gm43273-201ENSMUST00000199649 2594 ntBASIC13.91□□□□□ -0.18
Clp1Q99LI9 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Clp1Q99LI9 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC13.91□□□□□ -0.18
Clp1Q99LI9 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
Clp1Q99LI9 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Clp1Q99LI9 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
Clp1Q99LI9 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clp1Q99LI9 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clp1Q99LI9 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Clp1Q99LI9 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clp1Q99LI9 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clp1Q99LI9 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clp1Q99LI9 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Clp1Q99LI9 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Clp1Q99LI9 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC13.9□□□□□ -0.18
Clp1Q99LI9 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Clp1Q99LI9 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Clp1Q99LI9 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Clp1Q99LI9 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
Clp1Q99LI9 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Clp1Q99LI9 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Clp1Q99LI9 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Clp1Q99LI9 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Clp1Q99LI9 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Clp1Q99LI9 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC13.9□□□□□ -0.18
Clp1Q99LI9 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Clp1Q99LI9 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
Clp1Q99LI9 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Clp1Q99LI9 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Clp1Q99LI9 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Clp1Q99LI9 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC13.9□□□□□ -0.18
Clp1Q99LI9 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Clp1Q99LI9 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC13.9□□□□□ -0.18
Clp1Q99LI9 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Clp1Q99LI9 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC13.9□□□□□ -0.18
Clp1Q99LI9 Gm45925-201ENSMUST00000218882 744 ntBASIC13.9□□□□□ -0.18
Clp1Q99LI9 AC154595.3-201ENSMUST00000224579 384 ntBASIC13.9□□□□□ -0.18
Clp1Q99LI9 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Clp1Q99LI9 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Clp1Q99LI9 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Clp1Q99LI9 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Clp1Q99LI9 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC13.9□□□□□ -0.18
Clp1Q99LI9 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
Clp1Q99LI9 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Clp1Q99LI9 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Clp1Q99LI9 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Clp1Q99LI9 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Clp1Q99LI9 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Clp1Q99LI9 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Clp1Q99LI9 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Clp1Q99LI9 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
Clp1Q99LI9 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Clp1Q99LI9 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms