Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC19.14■□□□□ 0.65
NKX2-3Q8TAU0 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NKX2-3Q8TAU0 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC19.14■□□□□ 0.65
NKX2-3Q8TAU0 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
NKX2-3Q8TAU0 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC19.14■□□□□ 0.65
NKX2-3Q8TAU0 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC19.14■□□□□ 0.65
NKX2-3Q8TAU0 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NKX2-3Q8TAU0 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NKX2-3Q8TAU0 HILS1-202ENST00000545329 423 ntBASIC19.14■□□□□ 0.65
NKX2-3Q8TAU0 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC19.14■□□□□ 0.65
NKX2-3Q8TAU0 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC19.14■□□□□ 0.65
NKX2-3Q8TAU0 AC003101.2-201ENST00000612557 442 ntBASIC19.14■□□□□ 0.65
NKX2-3Q8TAU0 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC19.14■□□□□ 0.65
NKX2-3Q8TAU0 BANP-204ENST00000393208 2283 ntTSL 2 BASIC19.14■□□□□ 0.65
NKX2-3Q8TAU0 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
NKX2-3Q8TAU0 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
NKX2-3Q8TAU0 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NKX2-3Q8TAU0 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NKX2-3Q8TAU0 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
NKX2-3Q8TAU0 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
NKX2-3Q8TAU0 MTHFR-217ENST00000641820 1569 ntBASIC19.14■□□□□ 0.65
NKX2-3Q8TAU0 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
NKX2-3Q8TAU0 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
NKX2-3Q8TAU0 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
NKX2-3Q8TAU0 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC19.13■□□□□ 0.65
NKX2-3Q8TAU0 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
NKX2-3Q8TAU0 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC19.13■□□□□ 0.65
NKX2-3Q8TAU0 TSSK5P-201ENST00000423978 907 ntBASIC19.13■□□□□ 0.65
NKX2-3Q8TAU0 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
NKX2-3Q8TAU0 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC19.13■□□□□ 0.65
NKX2-3Q8TAU0 GIMAP3P-201ENST00000495150 836 ntBASIC19.13■□□□□ 0.65
NKX2-3Q8TAU0 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC19.13■□□□□ 0.65
NKX2-3Q8TAU0 LY6E-204ENST00000519546 971 ntTSL 2 BASIC19.13■□□□□ 0.65
NKX2-3Q8TAU0 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
NKX2-3Q8TAU0 CDK4-206ENST00000549606 558 ntTSL 2 BASIC19.13■□□□□ 0.65
NKX2-3Q8TAU0 AC105021.1-202ENST00000570572 669 ntBASIC19.13■□□□□ 0.65
NKX2-3Q8TAU0 MIR4321-201ENST00000592276 80 ntBASIC19.13■□□□□ 0.65
NKX2-3Q8TAU0 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC19.13■□□□□ 0.65
NKX2-3Q8TAU0 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC19.13■□□□□ 0.65
NKX2-3Q8TAU0 AC138969.3-201ENST00000546612 1459 ntBASIC19.13■□□□□ 0.65
NKX2-3Q8TAU0 AC138932.2-201ENST00000548268 1459 ntBASIC19.13■□□□□ 0.65
NKX2-3Q8TAU0 AC126755.4-201ENST00000549796 1459 ntBASIC19.13■□□□□ 0.65
NKX2-3Q8TAU0 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
NKX2-3Q8TAU0 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NKX2-3Q8TAU0 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NKX2-3Q8TAU0 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC19.13■□□□□ 0.65
NKX2-3Q8TAU0 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
NKX2-3Q8TAU0 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
NKX2-3Q8TAU0 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
NKX2-3Q8TAU0 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
NKX2-3Q8TAU0 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC19.12■□□□□ 0.65
NKX2-3Q8TAU0 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC19.12■□□□□ 0.65
NKX2-3Q8TAU0 DOC2GP-204ENST00000639052 2548 ntBASIC19.12■□□□□ 0.65
NKX2-3Q8TAU0 CYP2T1P-202ENST00000641596 2535 ntBASIC19.12■□□□□ 0.65
NKX2-3Q8TAU0 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
NKX2-3Q8TAU0 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC19.12■□□□□ 0.65
NKX2-3Q8TAU0 AC024909.3-201ENST00000611513 2257 ntBASIC19.12■□□□□ 0.65
NKX2-3Q8TAU0 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
NKX2-3Q8TAU0 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
NKX2-3Q8TAU0 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NKX2-3Q8TAU0 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NKX2-3Q8TAU0 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
NKX2-3Q8TAU0 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC19.12■□□□□ 0.65
NKX2-3Q8TAU0 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
NKX2-3Q8TAU0 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
NKX2-3Q8TAU0 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
NKX2-3Q8TAU0 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC19.12■□□□□ 0.65
NKX2-3Q8TAU0 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NKX2-3Q8TAU0 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
NKX2-3Q8TAU0 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
NKX2-3Q8TAU0 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
NKX2-3Q8TAU0 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC19.12■□□□□ 0.65
NKX2-3Q8TAU0 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC19.12■□□□□ 0.65
NKX2-3Q8TAU0 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC19.12■□□□□ 0.65
NKX2-3Q8TAU0 SATB1-217ENST00000493952 626 ntTSL 3 BASIC19.12■□□□□ 0.65
NKX2-3Q8TAU0 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC19.12■□□□□ 0.65
NKX2-3Q8TAU0 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
NKX2-3Q8TAU0 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC19.12■□□□□ 0.65
NKX2-3Q8TAU0 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC19.12■□□□□ 0.65
NKX2-3Q8TAU0 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
NKX2-3Q8TAU0 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NKX2-3Q8TAU0 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
NKX2-3Q8TAU0 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
NKX2-3Q8TAU0 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
NKX2-3Q8TAU0 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NKX2-3Q8TAU0 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NKX2-3Q8TAU0 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NKX2-3Q8TAU0 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
NKX2-3Q8TAU0 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC19.12■□□□□ 0.65
NKX2-3Q8TAU0 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
NKX2-3Q8TAU0 SP100-205ENST00000409824 1802 ntTSL 5 BASIC19.11■□□□□ 0.65
NKX2-3Q8TAU0 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NKX2-3Q8TAU0 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NKX2-3Q8TAU0 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NKX2-3Q8TAU0 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NKX2-3Q8TAU0 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NKX2-3Q8TAU0 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NKX2-3Q8TAU0 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NKX2-3Q8TAU0 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
NKX2-3Q8TAU0 SUPT20HL2-201ENST00000486479 2409 ntBASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms