Protein–RNA interactions for Protein: Q8C7N7

Aph1b, Gamma-secretase subunit APH-1B, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Aph1bQ8C7N7 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Aph1bQ8C7N7 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Aph1bQ8C7N7 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Aph1bQ8C7N7 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Aph1bQ8C7N7 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Aph1bQ8C7N7 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Aph1bQ8C7N7 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC13.11□□□□□ -0.31
Aph1bQ8C7N7 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Aph1bQ8C7N7 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Aph1bQ8C7N7 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Aph1bQ8C7N7 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC13.11□□□□□ -0.31
Aph1bQ8C7N7 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC13.11□□□□□ -0.31
Aph1bQ8C7N7 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Aph1bQ8C7N7 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Aph1bQ8C7N7 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Aph1bQ8C7N7 Gm6447-201ENSMUST00000118905 835 ntBASIC13.11□□□□□ -0.31
Aph1bQ8C7N7 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC13.11□□□□□ -0.31
Aph1bQ8C7N7 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC13.11□□□□□ -0.31
Aph1bQ8C7N7 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Aph1bQ8C7N7 Gm28760-201ENSMUST00000185995 736 ntBASIC13.11□□□□□ -0.31
Aph1bQ8C7N7 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Aph1bQ8C7N7 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Aph1bQ8C7N7 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Aph1bQ8C7N7 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Aph1bQ8C7N7 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC13.11□□□□□ -0.31
Aph1bQ8C7N7 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Aph1bQ8C7N7 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Aph1bQ8C7N7 Gm3052-202ENSMUST00000188254 2224 ntBASIC13.11□□□□□ -0.31
Aph1bQ8C7N7 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Aph1bQ8C7N7 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC13.11□□□□□ -0.31
Aph1bQ8C7N7 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Aph1bQ8C7N7 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Aph1bQ8C7N7 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC13.1□□□□□ -0.31
Aph1bQ8C7N7 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Aph1bQ8C7N7 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Aph1bQ8C7N7 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Aph1bQ8C7N7 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Aph1bQ8C7N7 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Aph1bQ8C7N7 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC13.1□□□□□ -0.31
Aph1bQ8C7N7 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Aph1bQ8C7N7 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Aph1bQ8C7N7 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC13.1□□□□□ -0.31
Aph1bQ8C7N7 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Aph1bQ8C7N7 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Aph1bQ8C7N7 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Aph1bQ8C7N7 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Aph1bQ8C7N7 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Aph1bQ8C7N7 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Aph1bQ8C7N7 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Aph1bQ8C7N7 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Aph1bQ8C7N7 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC13.1□□□□□ -0.31
Aph1bQ8C7N7 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC13.1□□□□□ -0.31
Aph1bQ8C7N7 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC13.1□□□□□ -0.31
Aph1bQ8C7N7 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
Aph1bQ8C7N7 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Aph1bQ8C7N7 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Aph1bQ8C7N7 Mir8102-201ENSMUST00000184148 139 ntBASIC13.1□□□□□ -0.31
Aph1bQ8C7N7 Gm31326-201ENSMUST00000191856 1048 ntBASIC13.1□□□□□ -0.31
Aph1bQ8C7N7 Gm45195-201ENSMUST00000205597 1008 ntBASIC13.1□□□□□ -0.31
Aph1bQ8C7N7 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Aph1bQ8C7N7 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Aph1bQ8C7N7 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Aph1bQ8C7N7 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Aph1bQ8C7N7 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Aph1bQ8C7N7 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Aph1bQ8C7N7 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC13.1□□□□□ -0.31
Aph1bQ8C7N7 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Aph1bQ8C7N7 Syt7-204ENSMUST00000223586 1344 ntBASIC13.1□□□□□ -0.31
Aph1bQ8C7N7 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Aph1bQ8C7N7 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Aph1bQ8C7N7 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Aph1bQ8C7N7 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Aph1bQ8C7N7 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Aph1bQ8C7N7 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Aph1bQ8C7N7 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Aph1bQ8C7N7 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Aph1bQ8C7N7 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Aph1bQ8C7N7 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Aph1bQ8C7N7 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Aph1bQ8C7N7 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC13.09□□□□□ -0.31
Aph1bQ8C7N7 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Aph1bQ8C7N7 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Aph1bQ8C7N7 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Aph1bQ8C7N7 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Aph1bQ8C7N7 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Aph1bQ8C7N7 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC13.09□□□□□ -0.31
Aph1bQ8C7N7 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Aph1bQ8C7N7 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Aph1bQ8C7N7 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Aph1bQ8C7N7 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Aph1bQ8C7N7 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Aph1bQ8C7N7 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Aph1bQ8C7N7 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
Aph1bQ8C7N7 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Aph1bQ8C7N7 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Aph1bQ8C7N7 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC13.09□□□□□ -0.31
Aph1bQ8C7N7 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC13.09□□□□□ -0.31
Aph1bQ8C7N7 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Aph1bQ8C7N7 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Aph1bQ8C7N7 Gm7730-201ENSMUST00000212486 454 ntBASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms