Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC10.31□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC10.31□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Gm6018-201ENSMUST00000216090 1306 ntBASIC10.31□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC10.31□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Gm43273-201ENSMUST00000199649 2594 ntBASIC10.3□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Gm43868-201ENSMUST00000205187 2114 ntBASIC10.3□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC10.3□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC10.3□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Gm43417-201ENSMUST00000201586 5207 ntBASIC10.3□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Gm25287-201ENSMUST00000103846 110 ntBASIC10.3□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Gm22918-201ENSMUST00000103855 110 ntBASIC10.3□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC10.3□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC10.3□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC10.3□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC10.3□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Gm18766-201ENSMUST00000189811 808 ntBASIC10.3□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC10.3□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC10.3□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC10.3□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Gm7049-201ENSMUST00000223520 1712 ntBASIC10.3□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC10.29□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Gm44401-201ENSMUST00000204462 2375 ntBASIC10.29□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC10.29□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC10.29□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Gm6912-201ENSMUST00000117218 544 ntBASIC10.29□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Gm11745-201ENSMUST00000121669 448 ntBASIC10.29□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC10.29□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC10.29□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC10.29□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC10.29□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms