Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav3-3Q5R1C3 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav3-3Q5R1C3 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav3-3Q5R1C3 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Trav3-3Q5R1C3 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav3-3Q5R1C3 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav3-3Q5R1C3 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Trav3-3Q5R1C3 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav3-3Q5R1C3 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav3-3Q5R1C3 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav3-3Q5R1C3 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC9.94□□□□□ -0.82
Trav3-3Q5R1C3 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Trav3-3Q5R1C3 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Trav3-3Q5R1C3 AC151895.1-201ENSMUST00000219025 1742 ntBASIC9.94□□□□□ -0.82
Trav3-3Q5R1C3 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav3-3Q5R1C3 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav3-3Q5R1C3 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Trav3-3Q5R1C3 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Trav3-3Q5R1C3 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC9.94□□□□□ -0.82
Trav3-3Q5R1C3 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav3-3Q5R1C3 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC9.94□□□□□ -0.82
Trav3-3Q5R1C3 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC9.94□□□□□ -0.82
Trav3-3Q5R1C3 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC9.94□□□□□ -0.82
Trav3-3Q5R1C3 Mir7036b-201ENSMUST00000184791 63 ntBASIC9.94□□□□□ -0.82
Trav3-3Q5R1C3 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC9.94□□□□□ -0.82
Trav3-3Q5R1C3 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Trav3-3Q5R1C3 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav3-3Q5R1C3 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav3-3Q5R1C3 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav3-3Q5R1C3 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav3-3Q5R1C3 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC9.94□□□□□ -0.82
Trav3-3Q5R1C3 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav3-3Q5R1C3 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC9.94□□□□□ -0.82
Trav3-3Q5R1C3 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Trav3-3Q5R1C3 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav3-3Q5R1C3 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav3-3Q5R1C3 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Trav3-3Q5R1C3 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav3-3Q5R1C3 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav3-3Q5R1C3 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav3-3Q5R1C3 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Trav3-3Q5R1C3 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav3-3Q5R1C3 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav3-3Q5R1C3 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav3-3Q5R1C3 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Trav3-3Q5R1C3 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Trav3-3Q5R1C3 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Trav3-3Q5R1C3 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav3-3Q5R1C3 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav3-3Q5R1C3 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav3-3Q5R1C3 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC9.93□□□□□ -0.82
Trav3-3Q5R1C3 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav3-3Q5R1C3 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
Trav3-3Q5R1C3 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav3-3Q5R1C3 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav3-3Q5R1C3 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC9.93□□□□□ -0.82
Trav3-3Q5R1C3 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav3-3Q5R1C3 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav3-3Q5R1C3 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav3-3Q5R1C3 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav3-3Q5R1C3 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Trav3-3Q5R1C3 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav3-3Q5R1C3 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Trav3-3Q5R1C3 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav3-3Q5R1C3 Gm44851-201ENSMUST00000205735 2309 ntBASIC9.93□□□□□ -0.82
Trav3-3Q5R1C3 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC9.93□□□□□ -0.82
Trav3-3Q5R1C3 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav3-3Q5R1C3 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav3-3Q5R1C3 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav3-3Q5R1C3 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC9.93□□□□□ -0.82
Trav3-3Q5R1C3 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC9.93□□□□□ -0.82
Trav3-3Q5R1C3 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Trav3-3Q5R1C3 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav3-3Q5R1C3 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC9.93□□□□□ -0.82
Trav3-3Q5R1C3 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav3-3Q5R1C3 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Trav3-3Q5R1C3 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC9.93□□□□□ -0.82
Trav3-3Q5R1C3 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Trav3-3Q5R1C3 Gm16026-204ENSMUST00000162652 683 ntBASIC9.93□□□□□ -0.82
Trav3-3Q5R1C3 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Trav3-3Q5R1C3 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC9.93□□□□□ -0.82
Trav3-3Q5R1C3 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Trav3-3Q5R1C3 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav3-3Q5R1C3 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav3-3Q5R1C3 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav3-3Q5R1C3 AC137842.1-201ENSMUST00000227896 2064 ntBASIC9.93□□□□□ -0.82
Trav3-3Q5R1C3 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav3-3Q5R1C3 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav3-3Q5R1C3 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Trav3-3Q5R1C3 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav3-3Q5R1C3 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC9.93□□□□□ -0.82
Trav3-3Q5R1C3 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav3-3Q5R1C3 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav3-3Q5R1C3 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC9.93□□□□□ -0.82
Trav3-3Q5R1C3 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC9.93□□□□□ -0.82
Trav3-3Q5R1C3 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC9.93□□□□□ -0.82
Trav3-3Q5R1C3 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav3-3Q5R1C3 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav3-3Q5R1C3 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Trav3-3Q5R1C3 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC9.92□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 68.6 ms