Protein–RNA interactions for Protein: P83110

HTRA3, Serine protease HTRA3, humanhuman

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTRA3P83110 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC18.47■□□□□ 0.55
HTRA3P83110 DNAJB13-203ENST00000537753 912 ntTSL 3 BASIC18.47■□□□□ 0.55
HTRA3P83110 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC18.47■□□□□ 0.55
HTRA3P83110 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC18.47■□□□□ 0.55
HTRA3P83110 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC18.47■□□□□ 0.55
HTRA3P83110 LINC01278-206ENST00000610088 554 ntTSL 4 BASIC18.47■□□□□ 0.55
HTRA3P83110 AC233280.19-201ENST00000633223 136 ntBASIC18.47■□□□□ 0.55
HTRA3P83110 AC006453.1-201ENST00000636037 1257 ntBASIC18.47■□□□□ 0.55
HTRA3P83110 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
HTRA3P83110 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HTRA3P83110 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
HTRA3P83110 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HTRA3P83110 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
HTRA3P83110 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HTRA3P83110 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
HTRA3P83110 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC18.47■□□□□ 0.55
HTRA3P83110 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC18.47■□□□□ 0.55
HTRA3P83110 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.47■□□□□ 0.55
HTRA3P83110 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HTRA3P83110 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HTRA3P83110 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
HTRA3P83110 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HTRA3P83110 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
HTRA3P83110 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HTRA3P83110 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HTRA3P83110 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HTRA3P83110 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.46■□□□□ 0.55
HTRA3P83110 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
HTRA3P83110 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HTRA3P83110 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
HTRA3P83110 SLC16A6P1-201ENST00000413214 1059 ntBASIC18.46■□□□□ 0.55
HTRA3P83110 AC245884.1-201ENST00000457113 529 ntTSL 3 BASIC18.46■□□□□ 0.55
HTRA3P83110 FABP5P3-202ENST00000477993 1027 ntTSL 5 BASIC18.46■□□□□ 0.55
HTRA3P83110 AC026410.3-201ENST00000514280 936 ntBASIC18.46■□□□□ 0.55
HTRA3P83110 IGHV3-37-201ENST00000518544 340 ntBASIC18.46■□□□□ 0.55
HTRA3P83110 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC18.46■□□□□ 0.55
HTRA3P83110 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HTRA3P83110 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC18.46■□□□□ 0.55
HTRA3P83110 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC18.46■□□□□ 0.55
HTRA3P83110 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
HTRA3P83110 AC100757.4-201ENST00000626934 759 ntBASIC18.46■□□□□ 0.55
HTRA3P83110 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
HTRA3P83110 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HTRA3P83110 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
HTRA3P83110 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
HTRA3P83110 DRD5P1-201ENST00000456605 1438 ntBASIC18.46■□□□□ 0.55
HTRA3P83110 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
HTRA3P83110 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
HTRA3P83110 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HTRA3P83110 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
HTRA3P83110 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
HTRA3P83110 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
HTRA3P83110 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
HTRA3P83110 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
HTRA3P83110 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
HTRA3P83110 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
HTRA3P83110 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.45■□□□□ 0.54
HTRA3P83110 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HTRA3P83110 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
HTRA3P83110 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HTRA3P83110 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC18.45■□□□□ 0.54
HTRA3P83110 ITGA9-AS1-205ENST00000438136 578 ntTSL 4 BASIC18.45■□□□□ 0.54
HTRA3P83110 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC18.45■□□□□ 0.54
HTRA3P83110 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC18.45■□□□□ 0.54
HTRA3P83110 REEP5-205ENST00000504247 480 ntTSL 5 BASIC18.45■□□□□ 0.54
HTRA3P83110 KRT18P25-201ENST00000508931 1278 ntBASIC18.45■□□□□ 0.54
HTRA3P83110 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC18.45■□□□□ 0.54
HTRA3P83110 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
HTRA3P83110 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
HTRA3P83110 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC18.45■□□□□ 0.54
HTRA3P83110 FAM192A-218ENST00000567439 1086 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
HTRA3P83110 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC18.45■□□□□ 0.54
HTRA3P83110 AC013467.2-201ENST00000605472 835 ntBASIC18.45■□□□□ 0.54
HTRA3P83110 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC18.45■□□□□ 0.54
HTRA3P83110 ETV2-207ENST00000619399 994 ntTSL 5 BASIC18.45■□□□□ 0.54
HTRA3P83110 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
HTRA3P83110 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
HTRA3P83110 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC18.45■□□□□ 0.54
HTRA3P83110 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
HTRA3P83110 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.45■□□□□ 0.54
HTRA3P83110 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
HTRA3P83110 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HTRA3P83110 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HTRA3P83110 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC18.44■□□□□ 0.54
HTRA3P83110 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
HTRA3P83110 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
HTRA3P83110 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
HTRA3P83110 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HTRA3P83110 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
HTRA3P83110 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HTRA3P83110 NDUFAB1P1-201ENST00000404262 460 ntBASIC18.44■□□□□ 0.54
HTRA3P83110 PDIA3P2-201ENST00000428073 158 ntBASIC18.44■□□□□ 0.54
HTRA3P83110 EHMT2-AS1-201ENST00000434689 373 ntTSL 3 BASIC18.44■□□□□ 0.54
HTRA3P83110 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
HTRA3P83110 RPL18P13-201ENST00000478088 569 ntBASIC18.44■□□□□ 0.54
HTRA3P83110 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC18.44■□□□□ 0.54
HTRA3P83110 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC18.44■□□□□ 0.54
HTRA3P83110 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
HTRA3P83110 RPS25-202ENST00000527673 835 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HTRA3P83110 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms